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The map label for this gene is 116516078

Identifier: 116516078

GI number: 116516078

Start: 1299317

End: 1299667

Strand: Reverse

Name: 116516078

Synonym: SPD_1272

Alternate gene names: NA

Gene position: 1299667-1299317 (Counterclockwise)

Preceding gene: 116517166

Following gene: 116516931

Centisome position: 63.52

GC content: 41.6

Gene sequence:

>351_bases
ATGACAATTCATCTATCTAGCCTAGGGCAGGTCTATCTCGTGTGTGGGAAGACTGATATGAGACAAGGAATCGATTCACT
GGCTTATCTGGTTAAAACCCACTTTGAATTGGATCCTTTCTCCGGTCAAGTTTTTCTCTTTTGTGGTGGACGTAAAGACC
GCTTTAAAGCCCTTTACTGGGATGGTCAAGGATTTTGGCTACTATATAAACGCTTTGAGAACGGCAGACTGACTTGGCCC
AGTACAGAAAAGGATGTCAAAGCTCTCACACCTGAACAAGTAGATTGGCTTATGAAGGGCTTTTCTATCACTCCCAAAAT
AAATTTATCAGAAAGTCGTGATTTCTATTGA

Upstream 100 bases:

>100_bases
GATATTCTGCTTAAAATTCGTATTGGCAAGCTTGAAGTAAGTTTTTTTCAATCTCTCAATCTCGAAATGGTAGAACAGCT
TTTGGATAAGGTGTTGCTCT

Downstream 100 bases:

>100_bases
AATGAGGACTTTCTTTTTAGTATAGTGAATTGAAATAAGATATGAACATCTCTATCAGGAAAGTCAAATTAATTTATAGA
AATATTTTAGCAGTCAAGGT

Product: IS66 family Orf2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYWDGQGFWLLYKRFENGRLTWP
STEKDVKALTPEQVDWLMKGFSITPKINLSESRDFY

Sequences:

>Translated_116_residues
MTIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYWDGQGFWLLYKRFENGRLTWP
STEKDVKALTPEQVDWLMKGFSITPKINLSESRDFY
>Mature_115_residues
TIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYWDGQGFWLLYKRFENGRLTWPS
TEKDVKALTPEQVDWLMKGFSITPKINLSESRDFY

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008878 [H]

Pfam domain/function: PF05717 Transposase_34 [H]

EC number: NA

Molecular weight: Translated: 13512; Mature: 13380

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYW
CEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEE
DGQGFWLLYKRFENGRLTWPSTEKDVKALTPEQVDWLMKGFSITPKINLSESRDFY
CCCCEEEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
TIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYW
EEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEE
DGQGFWLLYKRFENGRLTWPSTEKDVKALTPEQVDWLMKGFSITPKINLSESRDFY
CCCCEEEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]