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The map label for this gene is rpmF [H]

Identifier: 116516063

GI number: 116516063

Start: 1932488

End: 1932670

Strand: Direct

Name: rpmF [H]

Synonym: SPD_1963

Alternate gene names: 116516063

Gene position: 1932488-1932670 (Clockwise)

Preceding gene: 116517201

Following gene: 116516908

Centisome position: 94.45

GC content: 41.53

Gene sequence:

>183_bases
ATGGCAGTACCTGCACGTCGCACTTCAAAAGCGAAGAAAAACAAACGTCGTACACACTACAAAGTAACAGCTCCATCTGT
AAACTTTGACGAAACTACTGGAGATTACTCACGTTCTCACCGTGTATCACTTAAAGGATACTACAAAGGACGTAAAATCG
CTAAAGCTGCATCAGCTGAATAA

Upstream 100 bases:

>100_bases
GTCAAGTAACTTTACTTTACAAAAAAAATGTGTTATCCTAGTATGGTTGATGAAAATCAGTAGATTGAATCGAATATAAA
TACCTAAAGGAGAAATCAAA

Downstream 100 bases:

>100_bases
TAGAAGGGAGATACCATGCGCGTAAATATTACACTTGAACACAAAGAATCTGGTGAACGCTTGTACCTTACTTCTAAAAA
CAAACGTAACACTCCAGACC

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAVPARRTSKAKKNKRRTHYKVTAPSVNFDETTGDYSRSHRVSLKGYYKGRKIAKAASAE

Sequences:

>Translated_60_residues
MAVPARRTSKAKKNKRRTHYKVTAPSVNFDETTGDYSRSHRVSLKGYYKGRKIAKAASAE
>Mature_59_residues
AVPARRTSKAKKNKRRTHYKVTAPSVNFDETTGDYSRSHRVSLKGYYKGRKIAKAASAE

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002677
- InterPro:   IPR011332 [H]

Pfam domain/function: PF01783 Ribosomal_L32p [H]

EC number: NA

Molecular weight: Translated: 6772; Mature: 6641

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPARRTSKAKKNKRRTHYKVTAPSVNFDETTGDYSRSHRVSLKGYYKGRKIAKAASAE
CCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCC
>Mature Secondary Structure 
AVPARRTSKAKKNKRRTHYKVTAPSVNFDETTGDYSRSHRVSLKGYYKGRKIAKAASAE
CCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]