Click here to switch to the map view.

The map label for this gene is 116515935

Identifier: 116515935

GI number: 116515935

Start: 1443335

End: 1444486

Strand: Reverse

Name: 116515935

Synonym: SPD_1425

Alternate gene names: NA

Gene position: 1444486-1443335 (Counterclockwise)

Preceding gene: 116516383

Following gene: 116516785

Centisome position: 70.6

GC content: 43.06

Gene sequence:

>1152_bases
ATGAAACAATTTTTAGAACGGGCCAGCATTTTGGCTCTCTCCCTCGTTTTGATTACCTCCTTTTCCATTTCGAGTGCCCT
ACCAGCCATGTTTGACTATTATCAGGGTTATTCTAAGGAACAAATTGAGCTCTTGGTGAGCTTGCCTTCCTTTGGAATCA
TGATGATGTTACTGCTAAATGGTTTCTTAGAAAAAATATTTCCTGAGCGCTTACAGATTAGTTTGGGCTTGCTGATTTTA
TCATTGAGCGGTACAGCTCCCTTCTGGTACCAAGCCTATCCCTTTGTCTTTGGAACACGGCTTCTCTTTGGTTTGGGTCT
TGGGATGATCAATGCCAAGGCCATTTCTATTATCAGTGAACGCTACCAAGGAAAAAGGCGAATTCAGATGTTAGGGCTAC
GCGCTTCTGCAGAGGTCGTTGGAGCTTCTCTCATTACCTTGGCCGTCGGTCAGTTGTTGGCCTTTGGTTGGACAGCTATC
TTTCTAGCCTATAGTGCTGGATTTTTGGTGCTGCCCCTTTATCTGCTCTTTGTCCCTTATGGAAAATCAAAGAAAGAAGT
CAAGAAAAGAGCGAAGGAAGCAAGTCGTTTAACTCGAGAAATGAAAGGCTTGATTTTTACCTTAGCTATCGAAGCGGCAG
TTGTAGTTTGTACCAATACAGCTATTACCATCCGTATTCCAAGTTTGATGGTGGAAAGAGGATTGGGGGATGCCCAGTTA
TCTAGTTTTGTTCTTAGTATCATGCAGTTGATCGGGATTGTGGCTGGGGTGAGTTTTTCTTTCTTGATTTCTATCTTTAA
AGAGAAACTGCTCCTCTGGTCTGGTATTACCTTTGGCTTGGGGCAAATTGTGATTGCCTTGTCTTCATCCTTGTGGGTGG
TAGTAGCAGGAAGTGTTCTGGCTGGATTTGCCTATAGTGTAGTCTTGACGACGGTCTTTCAACTTGTCTCTGAACGAATT
CCAGCTAAACTCCTCAATCAAGCAACTTCATTTGCTGTATTAGGCTGTAGTTTCGGAGCCTTTACGACCCCATTTGTTCT
AGGTGCAATTGGCTTACTAACTCACAATGGGATGTTGGTCTTTAGTATCTTAGGAGGTTGGTTGATTGTAATCTCTATCT
TTGTCATGTACCTACTTCAGAAGAGAGCTTAG

Upstream 100 bases:

>100_bases
TTAAGAAGGAGTCTACAAACCAATGAGGCTTCTTCTTTTCTTGCTTATTTGATAACTATCAAAAAAGTAGAAGATTAAGA
GAAATATAGAAAGAGATTTC

Downstream 100 bases:

>100_bases
GATTGATTCCTAAGTTTTTCTTTTGATACTCAATGAAAATCAAAGAGCATAGTTGATTGAGTTTGGAATAGTACGCTGTA
GTTGCTAAAATATTTCTAGA

Product: transporter major facilitator family protein

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Permease; Arabinose Efflux Permease; Facilitator Superfamily Transporter Efflux Protein; Ypothetical Protein SMU.; Permease Of Facilitator Superfamily; MFS Family Transporter

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKQFLERASILALSLVLITSFSISSALPAMFDYYQGYSKEQIELLVSLPSFGIMMMLLLNGFLEKIFPERLQISLGLLIL
SLSGTAPFWYQAYPFVFGTRLLFGLGLGMINAKAISIISERYQGKRRIQMLGLRASAEVVGASLITLAVGQLLAFGWTAI
FLAYSAGFLVLPLYLLFVPYGKSKKEVKKRAKEASRLTREMKGLIFTLAIEAAVVVCTNTAITIRIPSLMVERGLGDAQL
SSFVLSIMQLIGIVAGVSFSFLISIFKEKLLLWSGITFGLGQIVIALSSSLWVVVAGSVLAGFAYSVVLTTVFQLVSERI
PAKLLNQATSFAVLGCSFGAFTTPFVLGAIGLLTHNGMLVFSILGGWLIVISIFVMYLLQKRA

Sequences:

>Translated_383_residues
MKQFLERASILALSLVLITSFSISSALPAMFDYYQGYSKEQIELLVSLPSFGIMMMLLLNGFLEKIFPERLQISLGLLIL
SLSGTAPFWYQAYPFVFGTRLLFGLGLGMINAKAISIISERYQGKRRIQMLGLRASAEVVGASLITLAVGQLLAFGWTAI
FLAYSAGFLVLPLYLLFVPYGKSKKEVKKRAKEASRLTREMKGLIFTLAIEAAVVVCTNTAITIRIPSLMVERGLGDAQL
SSFVLSIMQLIGIVAGVSFSFLISIFKEKLLLWSGITFGLGQIVIALSSSLWVVVAGSVLAGFAYSVVLTTVFQLVSERI
PAKLLNQATSFAVLGCSFGAFTTPFVLGAIGLLTHNGMLVFSILGGWLIVISIFVMYLLQKRA
>Mature_383_residues
MKQFLERASILALSLVLITSFSISSALPAMFDYYQGYSKEQIELLVSLPSFGIMMMLLLNGFLEKIFPERLQISLGLLIL
SLSGTAPFWYQAYPFVFGTRLLFGLGLGMINAKAISIISERYQGKRRIQMLGLRASAEVVGASLITLAVGQLLAFGWTAI
FLAYSAGFLVLPLYLLFVPYGKSKKEVKKRAKEASRLTREMKGLIFTLAIEAAVVVCTNTAITIRIPSLMVERGLGDAQL
SSFVLSIMQLIGIVAGVSFSFLISIFKEKLLLWSGITFGLGQIVIALSSSLWVVVAGSVLAGFAYSVVLTTVFQLVSERI
PAKLLNQATSFAVLGCSFGAFTTPFVLGAIGLLTHNGMLVFSILGGWLIVISIFVMYLLQKRA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41698; Mature: 41698

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFLERASILALSLVLITSFSISSALPAMFDYYQGYSKEQIELLVSLPSFGIMMMLLLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
GFLEKIFPERLQISLGLLILSLSGTAPFWYQAYPFVFGTRLLFGLGLGMINAKAISIISE
HHHHHHCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQGKRRIQMLGLRASAEVVGASLITLAVGQLLAFGWTAIFLAYSAGFLVLPLYLLFVPY
HHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
GKSKKEVKKRAKEASRLTREMKGLIFTLAIEAAVVVCTNTAITIRIPSLMVERGLGDAQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEHHHHHHCCCCHHHH
SSFVLSIMQLIGIVAGVSFSFLISIFKEKLLLWSGITFGLGQIVIALSSSLWVVVAGSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
AGFAYSVVLTTVFQLVSERIPAKLLNQATSFAVLGCSFGAFTTPFVLGAIGLLTHNGMLV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCHHH
FSILGGWLIVISIFVMYLLQKRA
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQFLERASILALSLVLITSFSISSALPAMFDYYQGYSKEQIELLVSLPSFGIMMMLLLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
GFLEKIFPERLQISLGLLILSLSGTAPFWYQAYPFVFGTRLLFGLGLGMINAKAISIISE
HHHHHHCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQGKRRIQMLGLRASAEVVGASLITLAVGQLLAFGWTAIFLAYSAGFLVLPLYLLFVPY
HHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
GKSKKEVKKRAKEASRLTREMKGLIFTLAIEAAVVVCTNTAITIRIPSLMVERGLGDAQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEHHHHHHCCCCHHHH
SSFVLSIMQLIGIVAGVSFSFLISIFKEKLLLWSGITFGLGQIVIALSSSLWVVVAGSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
AGFAYSVVLTTVFQLVSERIPAKLLNQATSFAVLGCSFGAFTTPFVLGAIGLLTHNGMLV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCHHH
FSILGGWLIVISIFVMYLLQKRA
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA