| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515902
Identifier: 116515902
GI number: 116515902
Start: 1944416
End: 1946500
Strand: Direct
Name: 116515902
Synonym: SPD_1973
Alternate gene names: NA
Gene position: 1944416-1946500 (Clockwise)
Preceding gene: 116515349
Following gene: 116516173
Centisome position: 95.03
GC content: 46.81
Gene sequence:
>2085_bases ATGAAACCACTACTTGAAACCATCGATACCCGCTTTGGTACTGCTAGCAAGCATGCCTTCTCTCGGGGAAATACCCTGCC ATACACAGGCGTGCCTTTTGGGATGAATTACTTTGTGCCCCAGACCAGTGACCAGGATGGATCTTGGTTTTTTGATCCGC ATCTGCCTATCTTTCAGGGGATTCGATTAACTCACCAGCCCAGTCCTTGGATTGGGGACTACTCTTGGCTCCTTCTGACA CCTGTCACCAGTCAACTGGGGGGAGACAGCCTCTTTCACCGCCAGTCTTCTTATGATATAGATAAAGCTTGCTTCCAGCC TCACTATTTGAAGCTCTTTTCTCTGCGTTATCAGATTGAAACCCAGCTCACACCGACTTGCTATGGTGCTTCTATTCGTT TGAAGCAAAAGCAAGGCAAAGCCCTCTCCCTCTATCTTCACGCAGCAGATGAACTGACAGTAGAGCAAGTAGATAAGCGG ACTCTTGCCCTGCGACAAGAAGGTAAAACTGAAACTAACAAAAATTCGCTAACGATGTTCACTGCCCTGCAAATGAACAC GGATATTCTTGCTATCAGCCAAGAAGCTGGGGACTGGCGAATTGACTTAGCAAGTAGTCAAACCGAGATGCAACTAGCCA CTTCTTTCATCTCTCCTTCTCAAGCTCTAATCAATCTACCTCAAGAAGATTTTGATAGCTGTAAAACAAGTGCCCAAGCG GATTGGGAAAATCTCCTCCATCGTTTTGACATTATAGAGACAGGAGAGGCTGACCGAACCTTCTTTGACCACTGCCTCTA CAGACTCTTCCTCTTCCCACAGACTTTTTATGAGGTTGATGAGTCAGGGAAAGCCATCCACATGGATCTGGCTACTGGTA CTGTCAAGCCTGGTGTCCTCTTTAGCAACAATGGTTTCTGGGATACCTTCCGCACCACCTTCCCCCTCTTTGCCCTTATC ATACCTGAGCACTATCAACGCTTTTTAGAAGGTTTCCTCAATAGCTACCGCGATACTGGTTTCCTTCCAAAATGGCTGGC TCCAGATGAACGGGGTATGATGCCAGGTACACTGCTAGATGGCATTATCGCAGATAGCGCCTGTAAGGACATGGCCCCCG ACCTAGAAGGAGAACTCTTCCAAGCCATGCTCGAAACAGCCAGCAAAGCCGACCCTCTCGGCATCAATGGCCGCCACGGA CTAGCCCAATACCAAGAACTAGGTTACCTCTCTACCGACCACCACGAAAGTGTTAGCCATACTCTAGACTATGCCTATAG TGACTTTTGTATCGCCAGCTGTGCCAAAAAACTAGAGAACATAGAAATCGCTGAAACCTACAAGGCTGCTTCACAAAATT ACCGCCAGCTATTTGACGCTGAGACAGGTTACATGCGAGCACGAGACAATCAAGGAAACTTTCACCCTGACTTCTCTCCT TATAGTTGGGGGCGAGACTACGCTGAATGCTCTGCCATTCAAGCTACTTTAGGCGTTCTCCACGACATCCCTGGCTTAAT CCAACTGATGGGTGGAAAAGAAACCTTTAGCAACTATCTTTTGAAAGCCTGTCAAGATGCTCCCCTCTTTGAAACAACAG GCTATGGTTACGAAATTCACGAAATGAGCGAGATGGCTACTGCTCCTTTTGGACAAATAGCCATTTCCAACCAGCCTAGT TTCCACATTCCTTATCTCTTCCGCTACAGCGATTACCCTGACTACACTGCCCTTCTTATCAAGACGCTCCGTCAGAAAGC TTTTCACCCAAGTTGGGAAGCCTATCCTGGAGATGAAGACAATGGTAGTCTCTCTGCTTGGTACATCTGGTCAGCTCTCG GATTTTATCCAACCTGTCCAGGAAAACCAAGCTATGATCTCGGAATCCCTCTCTTTGACCATCTACGAGTCTACCTAGCT AAAGAAAATAAATGGCTAGATATTCATACTGAGCAAAACCACAGCCATTTTAACTTTGTCAAAGAATGCCGACTGGACAA AACACTCGTATCAACTATTCAACACCAAGACCTCCTAAAAGCTGAACAACTAACTTTCACCCTCAGCTGGCTACCAAATC ACTAA
Upstream 100 bases:
>100_bases AATGATAGTCATTTTTCTACAAAATAGTTATCTTTAAAACTCCTTTTCTAAAGGCCCTCTTTTTCTGATATAATGTAGAA AAACAGCTAAAGGAAAGACT
Downstream 100 bases:
>100_bases TAACCAAAAGAACCTTTGCATCGCGCAAAGGTTCTTCTTTTATGAAACTTGGACTTGAAGTTGATCCACAAGCTGACCAT CCACCGTTAGGTTCAGATAG
Product: alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Secreted Protein; Outer Membrane Protein; Glycoside Hydrolase Family Protein; Cell Wall Antigen; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Glycosyl Hydrolase; Antigen; Glycosyltransferase; Lipoprotein; Mannosidase
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQGIRLTHQPSPWIGDYSWLLLT PVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIETQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKR TLALRQEGKTETNKNSLTMFTALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVLFSNNGFWDTFRTTFPLFALI IPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLDGIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHG LAQYQELGYLSTDHHESVSHTLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIHEMSEMATAPFGQIAISNQPS FHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDEDNGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLA KENKWLDIHTEQNHSHFNFVKECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH
Sequences:
>Translated_694_residues MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQGIRLTHQPSPWIGDYSWLLLT PVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIETQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKR TLALRQEGKTETNKNSLTMFTALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVLFSNNGFWDTFRTTFPLFALI IPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLDGIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHG LAQYQELGYLSTDHHESVSHTLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIHEMSEMATAPFGQIAISNQPS FHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDEDNGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLA KENKWLDIHTEQNHSHFNFVKECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH >Mature_694_residues MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQGIRLTHQPSPWIGDYSWLLLT PVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIETQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKR TLALRQEGKTETNKNSLTMFTALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVLFSNNGFWDTFRTTFPLFALI IPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLDGIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHG LAQYQELGYLSTDHHESVSHTLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIHEMSEMATAPFGQIAISNQPS FHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDEDNGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLA KENKWLDIHTEQNHSHFNFVKECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78938; Mature: 78938
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00256 AKH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQG CCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCCHHHHC IRLTHQPSPWIGDYSWLLLTPVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIE CEEECCCCCCCCCCEEEEEECHHHHCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHEEEEE TQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKRTLALRQEGKTETNKNSLTMF CCCCCEEECCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE TALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA EEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCC DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVL HHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE FSNNGFWDTFRTTFPLFALIIPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLD ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH GIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHGLAQYQELGYLSTDHHESVSH HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHH TLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIH CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCEEHH EMSEMATAPFGQIAISNQPSFHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDED HHHHHHCCCCCEEEECCCCCEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC NGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLAKENKWLDIHTEQNHSHFNFV CCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCHHHHH KECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC >Mature Secondary Structure MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQG CCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCCHHHHC IRLTHQPSPWIGDYSWLLLTPVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIE CEEECCCCCCCCCCEEEEEECHHHHCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHEEEEE TQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKRTLALRQEGKTETNKNSLTMF CCCCCEEECCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE TALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA EEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCC DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVL HHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE FSNNGFWDTFRTTFPLFALIIPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLD ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH GIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHGLAQYQELGYLSTDHHESVSH HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHH TLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIH CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCEEHH EMSEMATAPFGQIAISNQPSFHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDED HHHHHHCCCCCEEEECCCCCEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC NGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLAKENKWLDIHTEQNHSHFNFV CCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCHHHHH KECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA