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The map label for this gene is hrtB [H]

Identifier: 116495909

GI number: 116495909

Start: 2448880

End: 2449938

Strand: Direct

Name: hrtB [H]

Synonym: LSEI_2465

Alternate gene names: 116495909

Gene position: 2448880-2449938 (Clockwise)

Preceding gene: 116495905

Following gene: 116495910

Centisome position: 84.58

GC content: 46.84

Gene sequence:

>1059_bases
ATGTTTCTTGCCTATAAAGAGATTACGCACAACAAGGCCCGTTACCTTTTAGTGGTGGTGACTTTTGTGCTAATTTCCTA
CCTAGTTTTCTTTCTGACTGGCCTGGCAACCGGTTTAGCGCGGAACAACCGAACCGCGATTGATGCCTTACCAGGTAACT
ATGTGCTCATGTCAAAATACGCAAATAAAAATCTGTTAAGCTCGACTGTCACTAAGCAACAAGTCGACCAGGCAGACACT
CATCAGGCAGCGCTGCTTGGTCAAGTGTCCGTTGTCGCCGAAAACACCAAGACGAATCAAAAGGTGAACAGTAATATTTT
TGGTGTCAATCTTAGTGGCAAGTTGAAGCCACCTGTCACCAGCGGCCGAATGCCCGAGGACAGCAATGAGGTACTGGCTG
ACGACAGTGTTCTTCATTACGGCCTCCATCAAGGTGACCATATCACGCTCAATGGCAGCGATCAAAAGTATCACATTGTC
GGGCTCACCCATGATCGCCTTTTTTACACTGTACCTGTATTCTACACAACTTTAACGACTTTTCGGCAATTAAAATACGG
CCAAAGTCGTGTCCAGAACGTTTCGGTTTTGATTAGCCCGCACGCCTTCAAAAAGGTGCCCGCCAAAATGGAGCAAGTCA
CCCGAGCGACATTGATTAACAACATCCCCGGTTATACCGCCGAAACTTCGACGTTTGCTTTAATGATTGGTGCCATGATT
GGCATTATGTTGCTCATTATCGGTATTTTCATGTACATCTTAACAATCCAAAAAATCTCGATGTATGGCGTCATGCGGGC
GCAAGGTATCCGAACGCGTGCCATCATCGCCGCATTATTCTGGCAAATCCTAATGCTCGCCGTGGTGGGCGTTGCGGTGG
GGGCAGGCCTGTTGATGCTGACTGAGCTGATACTTCCCAAAACAATGCCATTTTATGCCAATAGTATCCTCTTTTTCAGC
ATTGCGACGGCGTTAATCGTCATGTCGCTTATTGGTGGACTATTTTCACTTCGACGCATTTTACGAATTGATCCATTAGC
AGCGATTGGAGGCGAATGA

Upstream 100 bases:

>100_bases
TGTTGTTCACGTTGATTCATTTTTTTAAGCTCTTTTCGTTTATCATTTGATAAATGAGTGATATTATAATTGTGCAAAAT
CAAATGTAGAGGTGATCAAG

Downstream 100 bases:

>100_bases
GATGGCAATTCTTATTCAGTTGAAACAAGTTAGTAAAACTTACGGTACTGGCCATACCGCGGTCACAGCTCTGTGCCCGA
CCGATTTCACTTTAAAGGCC

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MFLAYKEITHNKARYLLVVVTFVLISYLVFFLTGLATGLARNNRTAIDALPGNYVLMSKYANKNLLSSTVTKQQVDQADT
HQAALLGQVSVVAENTKTNQKVNSNIFGVNLSGKLKPPVTSGRMPEDSNEVLADDSVLHYGLHQGDHITLNGSDQKYHIV
GLTHDRLFYTVPVFYTTLTTFRQLKYGQSRVQNVSVLISPHAFKKVPAKMEQVTRATLINNIPGYTAETSTFALMIGAMI
GIMLLIIGIFMYILTIQKISMYGVMRAQGIRTRAIIAALFWQILMLAVVGVAVGAGLLMLTELILPKTMPFYANSILFFS
IATALIVMSLIGGLFSLRRILRIDPLAAIGGE

Sequences:

>Translated_352_residues
MFLAYKEITHNKARYLLVVVTFVLISYLVFFLTGLATGLARNNRTAIDALPGNYVLMSKYANKNLLSSTVTKQQVDQADT
HQAALLGQVSVVAENTKTNQKVNSNIFGVNLSGKLKPPVTSGRMPEDSNEVLADDSVLHYGLHQGDHITLNGSDQKYHIV
GLTHDRLFYTVPVFYTTLTTFRQLKYGQSRVQNVSVLISPHAFKKVPAKMEQVTRATLINNIPGYTAETSTFALMIGAMI
GIMLLIIGIFMYILTIQKISMYGVMRAQGIRTRAIIAALFWQILMLAVVGVAVGAGLLMLTELILPKTMPFYANSILFFS
IATALIVMSLIGGLFSLRRILRIDPLAAIGGE
>Mature_352_residues
MFLAYKEITHNKARYLLVVVTFVLISYLVFFLTGLATGLARNNRTAIDALPGNYVLMSKYANKNLLSSTVTKQQVDQADT
HQAALLGQVSVVAENTKTNQKVNSNIFGVNLSGKLKPPVTSGRMPEDSNEVLADDSVLHYGLHQGDHITLNGSDQKYHIV
GLTHDRLFYTVPVFYTTLTTFRQLKYGQSRVQNVSVLISPHAFKKVPAKMEQVTRATLINNIPGYTAETSTFALMIGAMI
GIMLLIIGIFMYILTIQKISMYGVMRAQGIRTRAIIAALFWQILMLAVVGVAVGAGLLMLTELILPKTMPFYANSILFFS
IATALIVMSLIGGLFSLRRILRIDPLAAIGGE

Specific function: Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. HrtB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 38721; Mature: 38721

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAYKEITHNKARYLLVVVTFVLISYLVFFLTGLATGLARNNRTAIDALPGNYVLMSKY
CEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEC
ANKNLLSSTVTKQQVDQADTHQAALLGQVSVVAENTKTNQKVNSNIFGVNLSGKLKPPVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCCCCCC
SGRMPEDSNEVLADDSVLHYGLHQGDHITLNGSDQKYHIVGLTHDRLFYTVPVFYTTLTT
CCCCCCCCCCEECCCCHHHHCCCCCCEEEECCCCCEEEEEEEECCCCEEHHHHHHHHHHH
FRQLKYGQSRVQNVSVLISPHAFKKVPAKMEQVTRATLINNIPGYTAETSTFALMIGAMI
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
GIMLLIIGIFMYILTIQKISMYGVMRAQGIRTRAIIAALFWQILMLAVVGVAVGAGLLML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELILPKTMPFYANSILFFSIATALIVMSLIGGLFSLRRILRIDPLAAIGGE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MFLAYKEITHNKARYLLVVVTFVLISYLVFFLTGLATGLARNNRTAIDALPGNYVLMSKY
CEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEC
ANKNLLSSTVTKQQVDQADTHQAALLGQVSVVAENTKTNQKVNSNIFGVNLSGKLKPPVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCCCCCC
SGRMPEDSNEVLADDSVLHYGLHQGDHITLNGSDQKYHIVGLTHDRLFYTVPVFYTTLTT
CCCCCCCCCCEECCCCHHHHCCCCCCEEEECCCCCEEEEEEEECCCCEEHHHHHHHHHHH
FRQLKYGQSRVQNVSVLISPHAFKKVPAKMEQVTRATLINNIPGYTAETSTFALMIGAMI
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
GIMLLIIGIFMYILTIQKISMYGVMRAQGIRTRAIIAALFWQILMLAVVGVAVGAGLLML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELILPKTMPFYANSILFFSIATALIVMSLIGGLFSLRRILRIDPLAAIGGE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA