| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495904
Identifier: 116495904
GI number: 116495904
Start: 2445135
End: 2445464
Strand: Direct
Name: 116495904
Synonym: LSEI_2460
Alternate gene names: NA
Gene position: 2445135-2445464 (Clockwise)
Preceding gene: 116495902
Following gene: 116495905
Centisome position: 84.45
GC content: 42.42
Gene sequence:
>330_bases ATGAAAGCGACTTATAAAGATCAATCCGCCGAAGTTTGGGAAATTAGTAAAAACAACGAATTCCCTGACTGGGTCAAAGA AGCTTTTGAAAAGAACTACCTTGTTTGGTTGGATGACCGACTTCGTATTTTAATGGCCGGTTTGTTTCCGCCAATGATCG AAAGCTTACAACGTGACAAAGCCAGCATTTTTCACGCTCAAGGCGTTCAGTTTGGGGTCGTGACAATTGGCTATCTAGGT GACTATTTGGACGTCACAAATCACCGCGTCGTCTCTAAGCAGCAGTTTGCTAGGCAGTATCGAATTGAAAAAACAGGCAA CCAATTTTAA
Upstream 100 bases:
>100_bases TTAACAAACAGCACAGTCATTCTTCCTTCCACAAATGGAACCTCAAAATCGCACAACTATTTAAACAAATAAATCCGACA ATCCGAATGTGAGGATACTG
Downstream 100 bases:
>100_bases TCCCACATTAAGTAAAAACGCATGTGAACAGACTAGTTCAGACTAGATGATCACATGCGTTTTTTTGGGTCTACACTTTC TGGTGTTGAGAAATAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKATYKDQSAEVWEISKNNEFPDWVKEAFEKNYLVWLDDRLRILMAGLFPPMIESLQRDKASIFHAQGVQFGVVTIGYLG DYLDVTNHRVVSKQQFARQYRIEKTGNQF
Sequences:
>Translated_109_residues MKATYKDQSAEVWEISKNNEFPDWVKEAFEKNYLVWLDDRLRILMAGLFPPMIESLQRDKASIFHAQGVQFGVVTIGYLG DYLDVTNHRVVSKQQFARQYRIEKTGNQF >Mature_109_residues MKATYKDQSAEVWEISKNNEFPDWVKEAFEKNYLVWLDDRLRILMAGLFPPMIESLQRDKASIFHAQGVQFGVVTIGYLG DYLDVTNHRVVSKQQFARQYRIEKTGNQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12806; Mature: 12806
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATYKDQSAEVWEISKNNEFPDWVKEAFEKNYLVWLDDRLRILMAGLFPPMIESLQRDK CCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHCCHHHHHHHHHHH ASIFHAQGVQFGVVTIGYLGDYLDVTNHRVVSKQQFARQYRIEKTGNQF HHHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKATYKDQSAEVWEISKNNEFPDWVKEAFEKNYLVWLDDRLRILMAGLFPPMIESLQRDK CCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHCCHHHHHHHHHHH ASIFHAQGVQFGVVTIGYLGDYLDVTNHRVVSKQQFARQYRIEKTGNQF HHHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA