| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yqiG [H]
Identifier: 116495855
GI number: 116495855
Start: 2396682
End: 2397845
Strand: Direct
Name: yqiG [H]
Synonym: LSEI_2409
Alternate gene names: 116495855
Gene position: 2396682-2397845 (Clockwise)
Preceding gene: 116495854
Following gene: 116495860
Centisome position: 82.78
GC content: 51.55
Gene sequence:
>1164_bases ATGTCGGGTTATCATTTTTTAAAACCGTTCACCTTCAAGCACCAAACCATCACGTTGAAAAATCGCATTGTCATTCCGCC GATGACAACGCGCCTGTCGTTTGAAGACGGCACTGTGACGCGGGACGAAATCAGGTATTACCAGCAACGGGCCGGTGGCG TCGGCATGTTTATTACCGGTACCGCCAATGTCAATGCGCTTGGCAAAGGATTCGAAGGTGAGCTAAGTGTCGCTGATGAT CGATTCATCCCCGGTTTGAGCAAACTCGCCGCTGCGATGAAAACAGGCGGCACCAAGGCTATTTTGCAAATCTTCAGCGC TGGCCGCATGAGCAATAGCAAGATTCTGCGCGGTGAGCAGCCAGTCAGTGCCAGTGCGGTTGCTGCGCCACGGGCGGGTT ACGAAACACCGCGCGCATTGACATCGGCAGAAATCGAGGCCACTATTCACGATTTTGGTCAGGCTGTGCGCCGCGCCATC CTTGCTGGTTTTGATGGCATCGAACTGCATGGTGCCAACACCTATCTGATACAGCAATTCTATTCGCCAAACTCTAATCG CCGAACCGATGAATGGGGCGGTGACCGCGATAAGCGGATGCGTTTTCCGTTGGCAGTCGTTCATGAAGCAGAAAAAGTGA TTGCCACAATTGCTGACCGGCCATTTTTGTTAGGCTACCGCATTTCGCCGGAAGAGTTGGAACAGCCTGGCATTACCTTG GATGATACCTTGGCCTTAATCGACACTTTGAAACAAACCAAGATTGATTACTTGCACGTCTCCCAAAGTGACGTTTGGCG AACCTCATTGCGCAACCCCGAGGACACAGCCATCATGAATGAACAAATTCGTGACCATGTCGCCGGTGCTTTTCCAGTGA TTGTGGTCGGTGGCATTAAAACCCCCGCCGATGCTGAGAAAGCGGCAGAATCCTTTGATTTGGTCGCGATTGGTCACGAA ATGATTCGCGAGCCGCACTGGGTTCAGAAGGTCTTAGACCATGACGAAAAGGCGATCCGTTACCAGATCGCCCCTGCTGA TCTTGAAGAACTTGGCATTGCGCCGACCTTCCTCGATTTTATCGAAAGTATTTCCGGTGGGGCAAAAGGTGTCCCGTTAA CAACTGCGCAGTCTGTGACATCAAGCAACGTGACTCAAGATTAA
Upstream 100 bases:
>100_bases TTGTATGCCATTGATCAACCGGCCAATGTTGCCATCAATGAAGTGCTCTTACGGCCAGTCACGCAAGAACGTTAATTTTC GTCTAAAGGAGTGTGATTGC
Downstream 100 bases:
>100_bases TCTAGCATTTCAAATCATCGTGCGAGTCGAGCTGTAAAAAGCTCGGCTTTTTTCTTGCCGTCTTCAACTTACGCGATGGT GCCTGAAGCTACCAGTGATT
Product: NADH:flavin oxidoreductase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSGYHFLKPFTFKHQTITLKNRIVIPPMTTRLSFEDGTVTRDEIRYYQQRAGGVGMFITGTANVNALGKGFEGELSVADD RFIPGLSKLAAAMKTGGTKAILQIFSAGRMSNSKILRGEQPVSASAVAAPRAGYETPRALTSAEIEATIHDFGQAVRRAI LAGFDGIELHGANTYLIQQFYSPNSNRRTDEWGGDRDKRMRFPLAVVHEAEKVIATIADRPFLLGYRISPEELEQPGITL DDTLALIDTLKQTKIDYLHVSQSDVWRTSLRNPEDTAIMNEQIRDHVAGAFPVIVVGGIKTPADAEKAAESFDLVAIGHE MIREPHWVQKVLDHDEKAIRYQIAPADLEELGIAPTFLDFIESISGGAKGVPLTTAQSVTSSNVTQD
Sequences:
>Translated_387_residues MSGYHFLKPFTFKHQTITLKNRIVIPPMTTRLSFEDGTVTRDEIRYYQQRAGGVGMFITGTANVNALGKGFEGELSVADD RFIPGLSKLAAAMKTGGTKAILQIFSAGRMSNSKILRGEQPVSASAVAAPRAGYETPRALTSAEIEATIHDFGQAVRRAI LAGFDGIELHGANTYLIQQFYSPNSNRRTDEWGGDRDKRMRFPLAVVHEAEKVIATIADRPFLLGYRISPEELEQPGITL DDTLALIDTLKQTKIDYLHVSQSDVWRTSLRNPEDTAIMNEQIRDHVAGAFPVIVVGGIKTPADAEKAAESFDLVAIGHE MIREPHWVQKVLDHDEKAIRYQIAPADLEELGIAPTFLDFIESISGGAKGVPLTTAQSVTSSNVTQD >Mature_386_residues SGYHFLKPFTFKHQTITLKNRIVIPPMTTRLSFEDGTVTRDEIRYYQQRAGGVGMFITGTANVNALGKGFEGELSVADDR FIPGLSKLAAAMKTGGTKAILQIFSAGRMSNSKILRGEQPVSASAVAAPRAGYETPRALTSAEIEATIHDFGQAVRRAIL AGFDGIELHGANTYLIQQFYSPNSNRRTDEWGGDRDKRMRFPLAVVHEAEKVIATIADRPFLLGYRISPEELEQPGITLD DTLALIDTLKQTKIDYLHVSQSDVWRTSLRNPEDTAIMNEQIRDHVAGAFPVIVVGGIKTPADAEKAAESFDLVAIGHEM IREPHWVQKVLDHDEKAIRYQIAPADLEELGIAPTFLDFIESISGGAKGVPLTTAQSVTSSNVTQD
Specific function: Unknown
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=351, Percent_Identity=32.1937321937322, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1789463, Length=235, Percent_Identity=32.3404255319149, Blast_Score=106, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17540738, Length=363, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17565138, Length=339, Percent_Identity=26.5486725663717, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17564188, Length=259, Percent_Identity=30.8880308880309, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17559804, Length=275, Percent_Identity=29.8181818181818, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI72001454, Length=262, Percent_Identity=31.6793893129771, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17559802, Length=264, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17566914, Length=269, Percent_Identity=25.2788104089219, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325086, Length=225, Percent_Identity=30.6666666666667, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6321973, Length=231, Percent_Identity=30.3030303030303, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 42452; Mature: 42320
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYHFLKPFTFKHQTITLKNRIVIPPMTTRLSFEDGTVTRDEIRYYQQRAGGVGMFITG CCCCCCCCCEEECCEEEEECCEEEECCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEE TANVNALGKGFEGELSVADDRFIPGLSKLAAAMKTGGTKAILQIFSAGRMSNSKILRGEQ CCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCC PVSASAVAAPRAGYETPRALTSAEIEATIHDFGQAVRRAILAGFDGIELHGANTYLIQQF CCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHH YSPNSNRRTDEWGGDRDKRMRFPLAVVHEAEKVIATIADRPFLLGYRISPEELEQPGITL HCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCH DDTLALIDTLKQTKIDYLHVSQSDVWRTSLRNPEDTAIMNEQIRDHVAGAFPVIVVGGIK HHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC TPADAEKAAESFDLVAIGHEMIREPHWVQKVLDHDEKAIRYQIAPADLEELGIAPTFLDF CCCHHHHHHHHCCEEEECHHHHHCCHHHHHHHCCCCCEEEEEECCCCHHHHCCCHHHHHH IESISGGAKGVPLTTAQSVTSSNVTQD HHHHCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure SGYHFLKPFTFKHQTITLKNRIVIPPMTTRLSFEDGTVTRDEIRYYQQRAGGVGMFITG CCCCCCCCEEECCEEEEECCEEEECCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEE TANVNALGKGFEGELSVADDRFIPGLSKLAAAMKTGGTKAILQIFSAGRMSNSKILRGEQ CCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCC PVSASAVAAPRAGYETPRALTSAEIEATIHDFGQAVRRAILAGFDGIELHGANTYLIQQF CCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHH YSPNSNRRTDEWGGDRDKRMRFPLAVVHEAEKVIATIADRPFLLGYRISPEELEQPGITL HCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCH DDTLALIDTLKQTKIDYLHVSQSDVWRTSLRNPEDTAIMNEQIRDHVAGAFPVIVVGGIK HHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC TPADAEKAAESFDLVAIGHEMIREPHWVQKVLDHDEKAIRYQIAPADLEELGIAPTFLDF CCCHHHHHHHHCCEEEECHHHHHCCHHHHHHHCCCCCEEEEEECCCCHHHHCCCHHHHHH IESISGGAKGVPLTTAQSVTSSNVTQD HHHHCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]