The gene/protein map for NC_008542 is currently unavailable.
Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116495665

Identifier: 116495665

GI number: 116495665

Start: 2207225

End: 2207395

Strand: Direct

Name: 116495665

Synonym: LSEI_2210

Alternate gene names: NA

Gene position: 2207225-2207395 (Clockwise)

Preceding gene: 116495663

Following gene: 116495669

Centisome position: 76.24

GC content: 46.2

Gene sequence:

>171_bases
ATGCTGAGCAATCGCGAGCCATATCCAATTATCGATTATTTAGGCCGACCTATCAAGCTGTCACTGTTTGTGACCTATCG
ATTACGCATTAAAAACGGCTATATCCTTGCACTGCGCCGAAATCAACATCAGCAAGTGATCCCGAACCTCATGGCCAAGA
ATGCGAGCTGA

Upstream 100 bases:

>100_bases
TTCTTACGCCAGTATAGCATGGACTTCAAGTCTGGCGAAGCGGGATTGTCATAAACTTGTTACACATACTGTTATATAAT
AGTAGTGGGAGATGAGGATG

Downstream 100 bases:

>100_bases
TTCGGTTGCTGCAACAGCCACTGATGAACGGTTACTAATTGGCTAGGATGGTGTGTATCAATGCACCATCCTTTTTTGAT
GGCGCCAGATGCGGCATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS

Sequences:

>Translated_56_residues
MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS
>Mature_56_residues
MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6599; Mature: 6599

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS
CCCCCCCCCHHHHCCCCEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS
CCCCCCCCCHHHHCCCCEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA