Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495655

Identifier: 116495655

GI number: 116495655

Start: 2196476

End: 2196844

Strand: Direct

Name: 116495655

Synonym: LSEI_2200

Alternate gene names: NA

Gene position: 2196476-2196844 (Clockwise)

Preceding gene: 116495645

Following gene: 116495656

Centisome position: 75.86

GC content: 44.44

Gene sequence:

>369_bases
ATGAAAAAAATCTTGATTGGTATTGGCATCTTCATTGGCCTCGTCATTCTTGGCGGTGCAGGGTTTTACGCTTGGTATAC
TCAAAGCACCCCTTATTACACCCAGATTACGACGACAGGCAAGAAGTTTGATGTTATCGATGATGAGACCGGTGCTGCGC
GGGATATTGATTATCCCTATACTCAGATGGCCTATGATGAAAAAGGCCACGGTACAGAGGTTGATTTCAACGGTCACAAA
TCTCGGCCTTTGAAAATGCAAGCTTATCTCCGCCTCGATTACAGCACGCGTCGAAACCAAGTGATTAGTTGGGAAGCCGT
ACCAAAGGAAAAGGTTCCTAAAGCAGCTTTAGCAAAATTAAATCGCTAA

Upstream 100 bases:

>100_bases
TTATAAGGTAATCGAGTCATTTTAATGTTCGAATGAATGATATTATTGTTATAATTTATACAATAAGTTGCATATACACC
GTTTGGGAGGGGATATGAAT

Downstream 100 bases:

>100_bases
TTAAAAAAAGTGCGCTGGCGCAGTTTGAAACCTGCGCCAGCAAACACATTTACAAGGAGATGTCTATTATGACGAATGAA
CACAAAGTTTTACGCGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPYTQMAYDEKGHGTEVDFNGHK
SRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR

Sequences:

>Translated_122_residues
MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPYTQMAYDEKGHGTEVDFNGHK
SRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR
>Mature_122_residues
MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPYTQMAYDEKGHGTEVDFNGHK
SRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR

Specific function: Unknown

COG id: COG5294

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13827; Mature: 13827

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPY
CCEEEEHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCC
TQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKL
HHEEECCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCHHCCHHHHHHC
NR
CC
>Mature Secondary Structure
MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPY
CCEEEEHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCC
TQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKL
HHEEECCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCHHCCHHHHHHC
NR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA