Click here to switch to the map view.

The map label for this gene is 116495634

Identifier: 116495634

GI number: 116495634

Start: 2169215

End: 2169859

Strand: Direct

Name: 116495634

Synonym: LSEI_2179

Alternate gene names: NA

Gene position: 2169215-2169859 (Clockwise)

Preceding gene: 116495633

Following gene: 116495636

Centisome position: 74.92

GC content: 48.22

Gene sequence:

>645_bases
ATGCGTAATGTTGCCAAACTTGTCGCCTTAGACATGGGTGCGCTTTACTCCGGCACGCATAAATACCGCTGGTGGTCATA
TCTGGTTGCTTTTCTGATCGTACTCATTGCCTTCTTGAATGGTGATGCCGCCACACCACTTGCTGGCGCTATCACCGGTA
CTAGCGTTGGTATCTTGATGATGCCGTTTGCCAGTGTTGATCGACATGGCTTGGAACAGTTGTACACGATGCTGCCTATC
CGCCGCCGAGAGATTGTCGCCAGTCACTACCTATTTGGCTTGCTCGTCATGCTGATGATTGATCTTTATGCCGCATTCAT
CGTTGCAGTCGGCATGATCGCTCGTTTCAACCCGATACATGACTACCATGCCATTATCTGGATGCTATTTTTCGCAACCG
GCCTTGTCTTATTACAAATGACATTGTCGTTTCCTCTAATGATTGGGCTTGGCTTCCAACGTGCCCCGTTAGCTGCTTAT
TTACCGATTGGCATTGTGTTACTCGCCGTTTTTATTGAGACCGGCTTAGACCTTGACTTAGCAGTCTTGCGGCCCTGGCT
CACGGCGTTCTCCATACTTTTGATCGTCGCCTTTGCGTTTTCTTGGTGGCTGAGTACCTATCTATATAAAAGGCGAGAAT
TTTAA

Upstream 100 bases:

>100_bases
TGGCCAGCTGACCAAGCAGCAATGTTGCCCGACAACATGATTCAGGAACCTGTCGATTTAGAAACATTGATGATCGCGTT
TGGTAAAGGAGGGCATCCCC

Downstream 100 bases:

>100_bases
CCTTTAAAAACCAAAAAGCCGTCACCTTGCTGCTTAGAGCAAAATGACGGCTTTTTGGTTGCTTTATTCAGTTAGCGAAC
AACCGACAACAGCAAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRNVAKLVALDMGALYSGTHKYRWWSYLVAFLIVLIAFLNGDAATPLAGAITGTSVGILMMPFASVDRHGLEQLYTMLPI
RRREIVASHYLFGLLVMLMIDLYAAFIVAVGMIARFNPIHDYHAIIWMLFFATGLVLLQMTLSFPLMIGLGFQRAPLAAY
LPIGIVLLAVFIETGLDLDLAVLRPWLTAFSILLIVAFAFSWWLSTYLYKRREF

Sequences:

>Translated_214_residues
MRNVAKLVALDMGALYSGTHKYRWWSYLVAFLIVLIAFLNGDAATPLAGAITGTSVGILMMPFASVDRHGLEQLYTMLPI
RRREIVASHYLFGLLVMLMIDLYAAFIVAVGMIARFNPIHDYHAIIWMLFFATGLVLLQMTLSFPLMIGLGFQRAPLAAY
LPIGIVLLAVFIETGLDLDLAVLRPWLTAFSILLIVAFAFSWWLSTYLYKRREF
>Mature_214_residues
MRNVAKLVALDMGALYSGTHKYRWWSYLVAFLIVLIAFLNGDAATPLAGAITGTSVGILMMPFASVDRHGLEQLYTMLPI
RRREIVASHYLFGLLVMLMIDLYAAFIVAVGMIARFNPIHDYHAIIWMLFFATGLVLLQMTLSFPLMIGLGFQRAPLAAY
LPIGIVLLAVFIETGLDLDLAVLRPWLTAFSILLIVAFAFSWWLSTYLYKRREF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24113; Mature: 24113

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVAKLVALDMGALYSGTHKYRWWSYLVAFLIVLIAFLNGDAATPLAGAITGTSVGILM
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
MPFASVDRHGLEQLYTMLPIRRREIVASHYLFGLLVMLMIDLYAAFIVAVGMIARFNPIH
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DYHAIIWMLFFATGLVLLQMTLSFPLMIGLGFQRAPLAAYLPIGIVLLAVFIETGLDLDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
AVLRPWLTAFSILLIVAFAFSWWLSTYLYKRREF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNVAKLVALDMGALYSGTHKYRWWSYLVAFLIVLIAFLNGDAATPLAGAITGTSVGILM
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
MPFASVDRHGLEQLYTMLPIRRREIVASHYLFGLLVMLMIDLYAAFIVAVGMIARFNPIH
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DYHAIIWMLFFATGLVLLQMTLSFPLMIGLGFQRAPLAAYLPIGIVLLAVFIETGLDLDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
AVLRPWLTAFSILLIVAFAFSWWLSTYLYKRREF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA