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The map label for this gene is soj [H]

Identifier: 116495441

GI number: 116495441

Start: 1947436

End: 1948278

Strand: Direct

Name: soj [H]

Synonym: LSEI_1975

Alternate gene names: 116495441

Gene position: 1947436-1948278 (Clockwise)

Preceding gene: 116495440

Following gene: 116495442

Centisome position: 67.26

GC content: 35.35

Gene sequence:

>843_bases
ATGACAGCAAAAGTTATTAGCTTTATCAATATGAAGGGTGGCGTAGGAAAAACAACCCTTTGCGTTGGAGTTTCAGAATT
CATGGCACATTTTAAGTCAAAAAAAATTTTGTTAATAGATTTGGACCCACAATTCAATGCCACTCAAACTTTGATGGATA
TGTATGACTTAACTGACCAATATATGAATGATATCCGTTTTAATAAGACTATTCGCTTGCTCTTCGAAGAAACTCATTCC
GTATCAGAGCGACCTGTGTTACCAAAACCAGACAAAGTAATTCTCCATCTAGACACTTCCGATGTTATCGATGGTGAGTT
AGACATCATTTGTGGTTCTATTGACCTAATTAAGGATGATGATTCGCGCAAATCCAAGTATAAAAGAGTCCGAAAATTTT
TAAGAGAACAAGGTCTCCTCAAACACTACGATTATATTTTTATCGACTGTCCTCCAACTATTTCATTTTATACAGATGCA
GCTTTGTACGCATCCGATTACTACATTGTACCGACTCGAATTGACAGATACTCAATCTTAGGTATCAATCTTCTTAAAAC
CGTCATTGAACAAGCAAAGTTTGACGATGACTTGTCAATAGAACCTCTTGGGCTCATATACACCAATTACCCCACCAACA
ATATACCTGCCCCAAAACAGCAAGAAATATTAGATGTATTAGAAGAAAACAAAGATGTTCTTGAAATCGGTGTTTTTAGA
AATAAATTTCACTACTTAGAACATTTAATGACCGGAAAGTCTGGTAACATTGCCTCAAAATATGTAAAATCTAAGAAGGA
TATAGAAAAGATATCCGTCGAAATCGAAAGTAAAGTCCACTGA

Upstream 100 bases:

>100_bases
TATCATTATCGGTGCGCTCATGATGATGGTCAGAAAGATGCAATAATGGGCAACTGTTAAACAGAAATAGCCCCGGTAGC
AAGGCATGGAGGTTTATATT

Downstream 100 bases:

>100_bases
AAGGAGTTTAGTACAAATGGTAAAACATCTAACACTGGCTCAGTTTCAGAACTTGCCTTCCTTTGCAGCTGATCAGTATG
TACTGGGTTACGCGGCGATG

Product: chromosome partitioning ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTAKVISFINMKGGVGKTTLCVGVSEFMAHFKSKKILLIDLDPQFNATQTLMDMYDLTDQYMNDIRFNKTIRLLFEETHS
VSERPVLPKPDKVILHLDTSDVIDGELDIICGSIDLIKDDDSRKSKYKRVRKFLREQGLLKHYDYIFIDCPPTISFYTDA
ALYASDYYIVPTRIDRYSILGINLLKTVIEQAKFDDDLSIEPLGLIYTNYPTNNIPAPKQQEILDVLEENKDVLEIGVFR
NKFHYLEHLMTGKSGNIASKYVKSKKDIEKISVEIESKVH

Sequences:

>Translated_280_residues
MTAKVISFINMKGGVGKTTLCVGVSEFMAHFKSKKILLIDLDPQFNATQTLMDMYDLTDQYMNDIRFNKTIRLLFEETHS
VSERPVLPKPDKVILHLDTSDVIDGELDIICGSIDLIKDDDSRKSKYKRVRKFLREQGLLKHYDYIFIDCPPTISFYTDA
ALYASDYYIVPTRIDRYSILGINLLKTVIEQAKFDDDLSIEPLGLIYTNYPTNNIPAPKQQEILDVLEENKDVLEIGVFR
NKFHYLEHLMTGKSGNIASKYVKSKKDIEKISVEIESKVH
>Mature_279_residues
TAKVISFINMKGGVGKTTLCVGVSEFMAHFKSKKILLIDLDPQFNATQTLMDMYDLTDQYMNDIRFNKTIRLLFEETHSV
SERPVLPKPDKVILHLDTSDVIDGELDIICGSIDLIKDDDSRKSKYKRVRKFLREQGLLKHYDYIFIDCPPTISFYTDAA
LYASDYYIVPTRIDRYSILGINLLKTVIEQAKFDDDLSIEPLGLIYTNYPTNNIPAPKQQEILDVLEENKDVLEIGVFRN
KFHYLEHLMTGKSGNIASKYVKSKKDIEKISVEIESKVH

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 32203; Mature: 32071

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKVISFINMKGGVGKTTLCVGVSEFMAHFKSKKILLIDLDPQFNATQTLMDMYDLTDQ
CCCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
YMNDIRFNKTIRLLFEETHSVSERPVLPKPDKVILHLDTSDVIDGELDIICGSIDLIKDD
HHHHHHHCHHHEEEEHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCEEEEECC
DSRKSKYKRVRKFLREQGLLKHYDYIFIDCPPTISFYTDAALYASDYYIVPTRIDRYSIL
CHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCHHCCCEEEECCEEEECCCCCCEEEH
GINLLKTVIEQAKFDDDLSIEPLGLIYTNYPTNNIPAPKQQEILDVLEENKDVLEIGVFR
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHH
NKFHYLEHLMTGKSGNIASKYVKSKKDIEKISVEIESKVH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCC
>Mature Secondary Structure 
TAKVISFINMKGGVGKTTLCVGVSEFMAHFKSKKILLIDLDPQFNATQTLMDMYDLTDQ
CCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
YMNDIRFNKTIRLLFEETHSVSERPVLPKPDKVILHLDTSDVIDGELDIICGSIDLIKDD
HHHHHHHCHHHEEEEHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCEEEEECC
DSRKSKYKRVRKFLREQGLLKHYDYIFIDCPPTISFYTDAALYASDYYIVPTRIDRYSIL
CHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCHHCCCEEEECCEEEECCCCCCEEEH
GINLLKTVIEQAKFDDDLSIEPLGLIYTNYPTNNIPAPKQQEILDVLEENKDVLEIGVFR
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHH
NKFHYLEHLMTGKSGNIASKYVKSKKDIEKISVEIESKVH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]