Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495436

Identifier: 116495436

GI number: 116495436

Start: 1944984

End: 1945589

Strand: Direct

Name: 116495436

Synonym: LSEI_1970

Alternate gene names: NA

Gene position: 1944984-1945589 (Clockwise)

Preceding gene: 116495435

Following gene: 116495437

Centisome position: 67.18

GC content: 37.95

Gene sequence:

>606_bases
ATGGCAAAAAAAGTAATGGGTGCTGATGGTAAGCAATATAAGGTAAAGAAGCCTTTTTACAAGCGCGTTTGGTTTTGGAT
ATTAGTTATTGTTGTGGTAGCAGCAATTGGCGGTGGCCTCAATAATAAGGGAAAATCAAGCAGCGAATCCACGGAAAAAA
CGGCAGTTAGCAAAACGGATAAATCATCTTCAAGTACAGCCTCATCTTCGGAACCGGAAGATAAAGTGTATAAAGTTGGT
GAAGTTGCAAGCTATAAAGGCTATGAAATTAAGGTAAATAATGTCAAATTCGACCAAGGCGATGACATTAACACTCCGGA
TTCAGGTAAGCAATATGTAATCGCAAATATCACAATCACAAACAACACCGACAAGTCACAAGATTATAACCCCTTCTTTT
TCAAATTAAATGCCGATGGTAACAAAACCGATTTCAGCGAGATTACCACAAATGTTGAAGATACGCTTCATTCAGGCTCT
TTAGATAAAGGTGCTACAGTTACGGGTAATCTTGTAGGACAAGCAAAAACAGATGCTAAGTCATTACAGCTTCAATATCA
GCCATCATTTTGGAATGACAAGTCAATCAAGATAGATCTGAAATAG

Upstream 100 bases:

>100_bases
ACCATATTTACGAGCCCAAAAGTCTACAATTTCTACAATTGATCATTATCAGTCCAAATACTGACGACTATAAAAGCTGA
ATATTTTGGAGGAAATCAAA

Downstream 100 bases:

>100_bases
TGTTTATTTCCCCGAGCAATTGGTAGAAGCCAAACGGCTTGGGGCTTTTGTTGGGCACAAAAATAGCCCCGGTAGCGAGG
GTTTAAGGAGAGTTGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAKKVMGADGKQYKVKKPFYKRVWFWILVIVVVAAIGGGLNNKGKSSSESTEKTAVSKTDKSSSSTASSSEPEDKVYKVG
EVASYKGYEIKVNNVKFDQGDDINTPDSGKQYVIANITITNNTDKSQDYNPFFFKLNADGNKTDFSEITTNVEDTLHSGS
LDKGATVTGNLVGQAKTDAKSLQLQYQPSFWNDKSIKIDLK

Sequences:

>Translated_201_residues
MAKKVMGADGKQYKVKKPFYKRVWFWILVIVVVAAIGGGLNNKGKSSSESTEKTAVSKTDKSSSSTASSSEPEDKVYKVG
EVASYKGYEIKVNNVKFDQGDDINTPDSGKQYVIANITITNNTDKSQDYNPFFFKLNADGNKTDFSEITTNVEDTLHSGS
LDKGATVTGNLVGQAKTDAKSLQLQYQPSFWNDKSIKIDLK
>Mature_200_residues
AKKVMGADGKQYKVKKPFYKRVWFWILVIVVVAAIGGGLNNKGKSSSESTEKTAVSKTDKSSSSTASSSEPEDKVYKVGE
VASYKGYEIKVNNVKFDQGDDINTPDSGKQYVIANITITNNTDKSQDYNPFFFKLNADGNKTDFSEITTNVEDTLHSGSL
DKGATVTGNLVGQAKTDAKSLQLQYQPSFWNDKSIKIDLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22061; Mature: 21930

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKVMGADGKQYKVKKPFYKRVWFWILVIVVVAAIGGGLNNKGKSSSESTEKTAVSKTD
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
KSSSSTASSSEPEDKVYKVGEVASYKGYEIKVNNVKFDQGDDINTPDSGKQYVIANITIT
CCCCCCCCCCCCHHHHEECCCCCCCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEEEEE
NNTDKSQDYNPFFFKLNADGNKTDFSEITTNVEDTLHSGSLDKGATVTGNLVGQAKTDAK
CCCCCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHHCCCCCCCCEEECCEEECCCCCCE
SLQLQYQPSFWNDKSIKIDLK
EEEEEECCCCCCCCCEEEEEC
>Mature Secondary Structure 
AKKVMGADGKQYKVKKPFYKRVWFWILVIVVVAAIGGGLNNKGKSSSESTEKTAVSKTD
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
KSSSSTASSSEPEDKVYKVGEVASYKGYEIKVNNVKFDQGDDINTPDSGKQYVIANITIT
CCCCCCCCCCCCHHHHEECCCCCCCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEEEEE
NNTDKSQDYNPFFFKLNADGNKTDFSEITTNVEDTLHSGSLDKGATVTGNLVGQAKTDAK
CCCCCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHHCCCCCCCCEEECCEEECCCCCCE
SLQLQYQPSFWNDKSIKIDLK
EEEEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA