| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495270
Identifier: 116495270
GI number: 116495270
Start: 1784102
End: 1784920
Strand: Direct
Name: 116495270
Synonym: LSEI_1791
Alternate gene names: NA
Gene position: 1784102-1784920 (Clockwise)
Preceding gene: 116495267
Following gene: 116495273
Centisome position: 61.62
GC content: 50.67
Gene sequence:
>819_bases ATGCAACTAAGTGCCAAGATCTTTGCCAAAGTCGGTAGCGAACGGATTACCCAGTATTCTTTAGTCAATGACCATCAGAT GACGCTACGTTTTTTAACGTTTGGTGCTCGGGTTCAACAGGTTCGCCTGCCAAATGCTGCAGGTGACGATCCTAATCTGC TGCTCGGGTTCGTCACGCTGGAAGACTACTTACACCAACCCGGTTACCTAGGCGCCTTTACCGGCCCTTTACAGGCAGCT GACGCTGAGCTAGCCCCGGGTTCATGGCAAAACTGGAATTGGGCGGTTAAAACCAGTCAAGAAACCGATCTAGCCATCAC ATTCACCCTAACATTACCTGAAAATGCTGACGGTCAGCCAGGCCAGCGAGAACTCAGTATTACCCACCGATTGACAAATG ACAATTTGTGGCAGATTGACATGCAGGTGGCAACCACTGCCGACTTGAAAATACATCCCCGGCTCAATTTGCCTTGGCTG CTCACTGCCGACCCTGCCCAAACAATGCTTTCAGCCAAGTTGACTGCCGATGAACATGTTACCCCTGTCCCTAAAACTGC CCGCTGTGAGACTGCGCAACGCTATTCCCTTGCGGCCGCCGATTGGCAGTTGGCATATCTAAGCGATGCTTCATTCACGA GAATTGATTCTTACGCTGGCATCAACTCCGAAAATAATTTTAACGGTATTCTCGGCCAACCCAATGTAGCAGTCGGCTTT TCGCCGGAAATGAACCAAGACGCTCTGCCGTGGGTGTTGCCAGCCGGTGCAACTTGGCGGCATCATGCGGAATTTCACTT ATCTAGCAACGCAAACTAA
Upstream 100 bases:
>100_bases CTCTTTCCCTTTAAGCCTAGCAGATTCACCGCGTAATTGCATTGAATCTCTGCCAATTTTTCTGTACGCTTAAGGGATTG AGAGAGGAAGCGTTTTCGTC
Downstream 100 bases:
>100_bases AAAGGTTTGACCCCACGGTATCTGTTGTGGGGTCAAACCTTTTTTCCAATCATTGATGATTAATAGTTCATAAAAACATC CTTGAAGACTTTAACACTGT
Product: aldose 1-epimerase
Products: beta-D-glucose
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTLEDYLHQPGYLGAFTGPLQAA DAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQPGQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWL LTADPAQTMLSAKLTADEHVTPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGF SPEMNQDALPWVLPAGATWRHHAEFHLSSNAN
Sequences:
>Translated_272_residues MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTLEDYLHQPGYLGAFTGPLQAA DAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQPGQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWL LTADPAQTMLSAKLTADEHVTPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGF SPEMNQDALPWVLPAGATWRHHAEFHLSSNAN >Mature_272_residues MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTLEDYLHQPGYLGAFTGPLQAA DAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQPGQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWL LTADPAQTMLSAKLTADEHVTPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGF SPEMNQDALPWVLPAGATWRHHAEFHLSSNAN
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.1.3.3
Molecular weight: Translated: 30038; Mature: 30038
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTL CCCCHHHHHHHCHHHHEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEE EDYLHQPGYLGAFTGPLQAADAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQP HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCC GQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWLLTADPAQTMLSAKLTADEHV CCEEEEEEEEECCCCEEEEEEEEEEEECEEEECCCCCCEEEECCHHHHHHEEECCCCCCC TPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGF CCCCCCCCCCCHHHEEEEECCEEEEEECCCCCEEEHHHCCCCCCCCCCCCCCCCCEEEEC SPEMNQDALPWVLPAGATWRHHAEFHLSSNAN CCCCCCCCCCEEEECCCCEEEEEEEEECCCCC >Mature Secondary Structure MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTL CCCCHHHHHHHCHHHHEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEE EDYLHQPGYLGAFTGPLQAADAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQP HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCC GQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWLLTADPAQTMLSAKLTADEHV CCEEEEEEEEECCCCEEEEEEEEEEEECEEEECCCCCCEEEECCHHHHHHEEECCCCCCC TPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGF CCCCCCCCCCCHHHEEEEECCEEEEEECCCCCEEEHHHCCCCCCCCCCCCCCCCCEEEEC SPEMNQDALPWVLPAGATWRHHAEFHLSSNAN CCCCCCCCCCEEEECCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: alpha-D-glucose
Specific reaction: alpha-D-glucose = beta-D-glucose
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA