| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is prsA [H]
Identifier: 116495203
GI number: 116495203
Start: 1715953
End: 1716855
Strand: Direct
Name: prsA [H]
Synonym: LSEI_1722
Alternate gene names: 116495203
Gene position: 1715953-1716855 (Clockwise)
Preceding gene: 116495202
Following gene: 116495207
Centisome position: 59.27
GC content: 42.64
Gene sequence:
>903_bases ATGAAAAAATGGATTCTCGGCGTTGTTGGTTTGTTTGTAGCAGTGACGTTAGCTGGTTGTTCAAGCAGCACGGTTGCAAA CATGAAAGGTGCCAAGGTCACCAAAGACGAGTACTATGACGCCATGAAGAAGACCACCACTGGCCAAGCAACATTGCGTA ACATGATTGTTTTGAAGGCATTGGAACAACAATACCCGAATAAGGTGTCTGATAAGAAGGTCAACAGTCAGTTCAATACA CTGAAGAAACAATATGGTTCTTCATTCGATACAACCCTTGAACAAAATGGGTATACCGAATCAAGTTTTAAGGATCAAAT TCGGACAACCTTGTACTCAGAAGTTGCCTTGAAGGCCCTCAAAAAGCCAACAGAAAAACAAATTGCTGCTCAGTGGAAGA AGTATCAACCGAAGATCACCGTGCAACATATCTTGGTCAAGACCGAAGATGAAGCTAAACAAATCATTTCCGACTACCAA AAAGACCCAACCGAAAAGAACTTTGAGGCCCTTGCCAAGAAGAACTCAATCGATACTGGAACAAAAGATAAGGGCGGTAA GTTGACGGCGTTTGACAACACCGATACTAGCTTGGATTCAACCTTCAAGAAAGCAGCCTTTAAGTTAACCAAGGCCGGCG ATATCACCACAACACCGGTTAAGACGCAGTATGGCTATCATGTTATCCGCGTTATCTCCGTTGGTAAAAAAGGCACGATG AAGGAACACAAGAAAGATTTGGAAAACCAGCTCTATACAACATGGCAGAGCGACCAAACCGTGATGAACGGTATCATCAC CAAAGTGCTTAAGAAGGAAAATGTTTCCATTAAGGATAACGACTTGAAGGATGTTCTTTCAAGCTATCTGAGCACCAGCT CAAGTACCAGTACTTCAAACTAA
Upstream 100 bases:
>100_bases GTTTCGTGAAACTTATGTGAAGATCCGCGTGCGGCAGTAAGTTATGGTATAGTAGACGGCAGTGTTAACCGAAACTTTTA AGATTAGGATGTGTGATTGC
Downstream 100 bases:
>100_bases AAATTAAATCAGTGTTAGCACTTGAAAGCCTCGCAATTAATTTTGCGAGGCTTTTATTTGTGTTGCAAACATGACGCAAT GAATGGCAAGTGATTGTTTG
Product: parvulin-like peptidyl-prolyl isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKKWILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMKKTTTGQATLRNMIVLKALEQQYPNKVSDKKVNSQFNT LKKQYGSSFDTTLEQNGYTESSFKDQIRTTLYSEVALKALKKPTEKQIAAQWKKYQPKITVQHILVKTEDEAKQIISDYQ KDPTEKNFEALAKKNSIDTGTKDKGGKLTAFDNTDTSLDSTFKKAAFKLTKAGDITTTPVKTQYGYHVIRVISVGKKGTM KEHKKDLENQLYTTWQSDQTVMNGIITKVLKKENVSIKDNDLKDVLSSYLSTSSSTSTSN
Sequences:
>Translated_300_residues MKKWILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMKKTTTGQATLRNMIVLKALEQQYPNKVSDKKVNSQFNT LKKQYGSSFDTTLEQNGYTESSFKDQIRTTLYSEVALKALKKPTEKQIAAQWKKYQPKITVQHILVKTEDEAKQIISDYQ KDPTEKNFEALAKKNSIDTGTKDKGGKLTAFDNTDTSLDSTFKKAAFKLTKAGDITTTPVKTQYGYHVIRVISVGKKGTM KEHKKDLENQLYTTWQSDQTVMNGIITKVLKKENVSIKDNDLKDVLSSYLSTSSSTSTSN >Mature_300_residues MKKWILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMKKTTTGQATLRNMIVLKALEQQYPNKVSDKKVNSQFNT LKKQYGSSFDTTLEQNGYTESSFKDQIRTTLYSEVALKALKKPTEKQIAAQWKKYQPKITVQHILVKTEDEAKQIISDYQ KDPTEKNFEALAKKNSIDTGTKDKGGKLTAFDNTDTSLDSTFKKAAFKLTKAGDITTTPVKTQYGYHVIRVISVGKKGTM KEHKKDLENQLYTTWQSDQTVMNGIITKVLKKENVSIKDNDLKDVLSSYLSTSSSTSTSN
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 33498; Mature: 33498
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01181 RIBOSOMAL_S21 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMKKTTTGQATLRNMIVLKA CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LEQQYPNKVSDKKVNSQFNTLKKQYGSSFDTTLEQNGYTESSFKDQIRTTLYSEVALKAL HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KKPTEKQIAAQWKKYQPKITVQHILVKTEDEAKQIISDYQKDPTEKNFEALAKKNSIDTG HCCHHHHHHHHHHHCCCCEEEHHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC TKDKGGKLTAFDNTDTSLDSTFKKAAFKLTKAGDITTTPVKTQYGYHVIRVISVGKKGTM CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCH KEHKKDLENQLYTTWQSDQTVMNGIITKVLKKENVSIKDNDLKDVLSSYLSTSSSTSTSN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKWILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMKKTTTGQATLRNMIVLKA CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LEQQYPNKVSDKKVNSQFNTLKKQYGSSFDTTLEQNGYTESSFKDQIRTTLYSEVALKAL HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KKPTEKQIAAQWKKYQPKITVQHILVKTEDEAKQIISDYQKDPTEKNFEALAKKNSIDTG HCCHHHHHHHHHHHCCCCEEEHHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC TKDKGGKLTAFDNTDTSLDSTFKKAAFKLTKAGDITTTPVKTQYGYHVIRVISVGKKGTM CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCH KEHKKDLENQLYTTWQSDQTVMNGIITKVLKKENVSIKDNDLKDVLSSYLSTSSSTSTSN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA