| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
Click here to switch to the map view.
The map label for this gene is 116495183
Identifier: 116495183
GI number: 116495183
Start: 1694214
End: 1694783
Strand: Direct
Name: 116495183
Synonym: LSEI_1702
Alternate gene names: NA
Gene position: 1694214-1694783 (Clockwise)
Preceding gene: 116495177
Following gene: 116495196
Centisome position: 58.52
GC content: 44.74
Gene sequence:
>570_bases ATGGCAACAATTGACTTAGTGAGGCATGCTGAACCAGACATCACGATTCATGATGATTTTTTGCGGCCACTGACCAGCGC TGGTCAGCGGCAAACTCAGCAGTTGGTTGACAGTTTGCATCAATATCCGTACACGGCCTTTTTTTCAAGCCCACTCAAAC GTGCTGTTGATACGATCACACCGATTGCAGATGATCACGGCTTACCCGTTCAAAAAAACGAACTATTGGTGGAGCGAAAA ATGCCTGCATGGCTGCCAAATTTTTCTGACTATGTTAATCAGCAGTGGCAAGATTTAACATTCTTTGAAAAACCTGGTGA ATCTATTCATCAAGTTCAAGAACGTTACCTTTCATTTTTATATGGACTGCCAAGTTCGGCATTCGTCGCTGTCGGTAGTC ATGGCACGGCGATAAGCAGTCTTGTCGAAGCGGCCATCCCCGGTATCGGCTATCATTTTTTCTCGAAACTTGGTTACGCC GCTGTCACCCGTATCGAAATGCATGCAGGCAATATGGTTCACCTAGCTGTCTGGGAACCAAAATCAAAGACATTTAAAGT TCTAAAATAG
Upstream 100 bases:
>100_bases TACATGCTGAAAACAAATGGCGGATGTGCTAAATTTGGCGAGAACAAACCTGTTCCTAAAGATACTAACAACAAAATTAT GAATGAATGGAGAAATCACC
Downstream 100 bases:
>100_bases TGTTTCCAAACCTCAAAATAATCCAAAACTGATGGCGCTTTTCGGGATTTTGATCAAAAGAAAAAGGAGCTTTGAGAACA ATGTCTCAAAAGTTCCTTCC
Product: phosphoglycerate mutase family protein
Products: NA
Alternate protein names: Phosphoglycerate Mutase
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MATIDLVRHAEPDITIHDDFLRPLTSAGQRQTQQLVDSLHQYPYTAFFSSPLKRAVDTITPIADDHGLPVQKNELLVERK MPAWLPNFSDYVNQQWQDLTFFEKPGESIHQVQERYLSFLYGLPSSAFVAVGSHGTAISSLVEAAIPGIGYHFFSKLGYA AVTRIEMHAGNMVHLAVWEPKSKTFKVLK
Sequences:
>Translated_189_residues MATIDLVRHAEPDITIHDDFLRPLTSAGQRQTQQLVDSLHQYPYTAFFSSPLKRAVDTITPIADDHGLPVQKNELLVERK MPAWLPNFSDYVNQQWQDLTFFEKPGESIHQVQERYLSFLYGLPSSAFVAVGSHGTAISSLVEAAIPGIGYHFFSKLGYA AVTRIEMHAGNMVHLAVWEPKSKTFKVLK >Mature_188_residues ATIDLVRHAEPDITIHDDFLRPLTSAGQRQTQQLVDSLHQYPYTAFFSSPLKRAVDTITPIADDHGLPVQKNELLVERKM PAWLPNFSDYVNQQWQDLTFFEKPGESIHQVQERYLSFLYGLPSSAFVAVGSHGTAISSLVEAAIPGIGYHFFSKLGYAA VTRIEMHAGNMVHLAVWEPKSKTFKVLK
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21283; Mature: 21152
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIDLVRHAEPDITIHDDFLRPLTSAGQRQTQQLVDSLHQYPYTAFFSSPLKRAVDTIT CCCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC PIADDHGLPVQKNELLVERKMPAWLPNFSDYVNQQWQDLTFFEKPGESIHQVQERYLSFL CCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHH YGLPSSAFVAVGSHGTAISSLVEAAIPGIGYHFFSKLGYAAVTRIEMHAGNMVHLAVWEP HCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEECC KSKTFKVLK CCCCCCCCC >Mature Secondary Structure ATIDLVRHAEPDITIHDDFLRPLTSAGQRQTQQLVDSLHQYPYTAFFSSPLKRAVDTIT CCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC PIADDHGLPVQKNELLVERKMPAWLPNFSDYVNQQWQDLTFFEKPGESIHQVQERYLSFL CCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHH YGLPSSAFVAVGSHGTAISSLVEAAIPGIGYHFFSKLGYAAVTRIEMHAGNMVHLAVWEP HCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEECC KSKTFKVLK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA