| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is cls [H]
Identifier: 116494950
GI number: 116494950
Start: 1456703
End: 1458172
Strand: Direct
Name: cls [H]
Synonym: LSEI_1464
Alternate gene names: 116494950
Gene position: 1456703-1458172 (Clockwise)
Preceding gene: 116494948
Following gene: 116494953
Centisome position: 50.31
GC content: 45.92
Gene sequence:
>1470_bases ATGTCGCTGATTACCTGGCTTATTCTTATTATTTTGGTTTTAAACACCTTCGGGGCAATCTTCACGGTTCTACGCGAGGT CCGAGATATCTCAACGACTTGGGCGTGGTTGCTAGTGCTTATTTTTTTACCGATCGTCGGGTTTGGTTTTTATTTATTTG CTGGCCGCGGCTTATCAACGAAAAAATTGCAACGGATTCAACACGAATATGAGTCTGGCGTAAAAGCATTTGTCTCACTA CAAAAGCACGAAAACGCCCGGAATAAGTTATTGCCACCGACTGATTACACGCCAGCGGCCAAGGCTTTAACCGCCTTTTT TCTGAATACCGCGCAAGCACCGGTCCTTGCCCATAACCAAGTGCAACTTTACACGGATGGCGAGAAAAAGTTTGCGGCGT TATTCCGCGATATTGAGGCCGCTAAAGATTATATCTATGTTGAGTACTACACCATTTACAATGATGAATTAGGCAATCAA TTCCAGCAACTGCTGATCAAGAAAGCTAAGGAAGGCGTTGTTGTAAAGGTCCTATATGACGCTTGGGGTTCCATGGGCGC TACAGCAAAGTGGTGGCGCCGGCTGACCGACGTTGGCGGGCAAGCCGAAAGTTACTTTAGTTCCAAGCATCCCATCACTG ACTTTCGTTTGAACTATCGTGATCATCGCAAGATCGTTGTCATTGACGACCACGTCGGGTATATCGGCGGGTTTAATGTT GGTGACCAATACGTCTCCCGCAAACCTAAGTTCGGTTATTGGCGCGACACACATTTGCGCATTATCGGCAATACGATTTA CGCTTTAAAAATTCGCTTCACCATGGATTGGAATGCAACAGTCAGCAAAAAAGACGAAATTGCTTATAGTGTTGAACAAG ATAGTGCCGATAGTGTCACTGCCGACAGTTTGACAGCCGGTGCAACGCCTATCCAGATCGTTGCTTCCGGACCTGACCGC CCAACGCAACAAATTAAGTTGGGATACACCAAGTTAATCACCAGTGCCACCAAATCTGTTTGGATTCAAAGTCCTTATTT GGTGCCAGATGATACTGTGATCGACGCTTTAGTATCCGCTGCCATGTCAGGGATTGATGTTCGCATCATGATTCCTGACA TGCCTGATCACCCGTTCATTTTCCGCGCGACACAATACTATGCGAATTATCTGACTCGCGCTGGCGTGAAAATCTACCAT TACGAACACGGCTTTATGCATGCGAAAACGGTGGTTGTCGACAATGCCATCGCCAGCGTTGGCTCGGCAAATTTCGATAT CCGTAGTTTTAAGCTGAATTTTGAAATTAATGCGTTTATTTATGATCGTAAAGTGGCCAGTAGCTTGGGCCAGATTTTCG AGGCTGATATGGCGCGCAGTTACTTACTGACGCCTGAGCTAATCGCCAAACAAAGCAGTTGGCTTCGGTTTAAACAAGAC TTCTCGCGGTTATTATCACCTATTCTTTAA
Upstream 100 bases:
>100_bases CTCCTACCCAAATATTTCGCAAATCCTCCTATTTGCCCCTCCAACGTGACAGCCTCGCTTCGCTTGAGTACAATGAACTT ATTCTTCTTGGAGGTGCGGT
Downstream 100 bases:
>100_bases GTAAAAACTGGCGCTTTATTCTGAATGATGTCAGAATAAAGCGCCAGTTTTTACTATATAAAGCTTCATTAACGTTGCCA GTCGTCCAAGACTTTGGTGT
Product: phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MSLITWLILIILVLNTFGAIFTVLREVRDISTTWAWLLVLIFLPIVGFGFYLFAGRGLSTKKLQRIQHEYESGVKAFVSL QKHENARNKLLPPTDYTPAAKALTAFFLNTAQAPVLAHNQVQLYTDGEKKFAALFRDIEAAKDYIYVEYYTIYNDELGNQ FQQLLIKKAKEGVVVKVLYDAWGSMGATAKWWRRLTDVGGQAESYFSSKHPITDFRLNYRDHRKIVVIDDHVGYIGGFNV GDQYVSRKPKFGYWRDTHLRIIGNTIYALKIRFTMDWNATVSKKDEIAYSVEQDSADSVTADSLTAGATPIQIVASGPDR PTQQIKLGYTKLITSATKSVWIQSPYLVPDDTVIDALVSAAMSGIDVRIMIPDMPDHPFIFRATQYYANYLTRAGVKIYH YEHGFMHAKTVVVDNAIASVGSANFDIRSFKLNFEINAFIYDRKVASSLGQIFEADMARSYLLTPELIAKQSSWLRFKQD FSRLLSPIL
Sequences:
>Translated_489_residues MSLITWLILIILVLNTFGAIFTVLREVRDISTTWAWLLVLIFLPIVGFGFYLFAGRGLSTKKLQRIQHEYESGVKAFVSL QKHENARNKLLPPTDYTPAAKALTAFFLNTAQAPVLAHNQVQLYTDGEKKFAALFRDIEAAKDYIYVEYYTIYNDELGNQ FQQLLIKKAKEGVVVKVLYDAWGSMGATAKWWRRLTDVGGQAESYFSSKHPITDFRLNYRDHRKIVVIDDHVGYIGGFNV GDQYVSRKPKFGYWRDTHLRIIGNTIYALKIRFTMDWNATVSKKDEIAYSVEQDSADSVTADSLTAGATPIQIVASGPDR PTQQIKLGYTKLITSATKSVWIQSPYLVPDDTVIDALVSAAMSGIDVRIMIPDMPDHPFIFRATQYYANYLTRAGVKIYH YEHGFMHAKTVVVDNAIASVGSANFDIRSFKLNFEINAFIYDRKVASSLGQIFEADMARSYLLTPELIAKQSSWLRFKQD FSRLLSPIL >Mature_488_residues SLITWLILIILVLNTFGAIFTVLREVRDISTTWAWLLVLIFLPIVGFGFYLFAGRGLSTKKLQRIQHEYESGVKAFVSLQ KHENARNKLLPPTDYTPAAKALTAFFLNTAQAPVLAHNQVQLYTDGEKKFAALFRDIEAAKDYIYVEYYTIYNDELGNQF QQLLIKKAKEGVVVKVLYDAWGSMGATAKWWRRLTDVGGQAESYFSSKHPITDFRLNYRDHRKIVVIDDHVGYIGGFNVG DQYVSRKPKFGYWRDTHLRIIGNTIYALKIRFTMDWNATVSKKDEIAYSVEQDSADSVTADSLTAGATPIQIVASGPDRP TQQIKLGYTKLITSATKSVWIQSPYLVPDDTVIDALVSAAMSGIDVRIMIPDMPDHPFIFRATQYYANYLTRAGVKIYHY EHGFMHAKTVVVDNAIASVGSANFDIRSFKLNFEINAFIYDRKVASSLGQIFEADMARSYLLTPELIAKQSSWLRFKQDF SRLLSPIL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=494, Percent_Identity=28.1376518218623, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI1787007, Length=369, Percent_Identity=26.2872628726287, Blast_Score=137, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 55469; Mature: 55338
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLITWLILIILVLNTFGAIFTVLREVRDISTTWAWLLVLIFLPIVGFGFYLFAGRGLST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH KKLQRIQHEYESGVKAFVSLQKHENARNKLLPPTDYTPAAKALTAFFLNTAQAPVLAHNQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCE VQLYTDGEKKFAALFRDIEAAKDYIYVEYYTIYNDELGNQFQQLLIKKAKEGVVVKVLYD EEEEECCHHHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEEEC AWGSMGATAKWWRRLTDVGGQAESYFSSKHPITDFRLNYRDHRKIVVIDDHVGYIGGFNV CCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCEECCCCC GDQYVSRKPKFGYWRDTHLRIIGNTIYALKIRFTMDWNATVSKKDEIAYSVEQDSADSVT CHHHHCCCCCCCCCCCCEEEEEECEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCC ADSLTAGATPIQIVASGPDRPTQQIKLGYTKLITSATKSVWIQSPYLVPDDTVIDALVSA CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHH AMSGIDVRIMIPDMPDHPFIFRATQYYANYLTRAGVKIYHYEHGFMHAKTVVVDNAIASV HHCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCEEEEEEECCCEEEEEEEEHHHHHHC GSANFDIRSFKLNFEINAFIYDRKVASSLGQIFEADMARSYLLTPELIAKQSSWLRFKQD CCCCCEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH FSRLLSPIL HHHHHHCCC >Mature Secondary Structure SLITWLILIILVLNTFGAIFTVLREVRDISTTWAWLLVLIFLPIVGFGFYLFAGRGLST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH KKLQRIQHEYESGVKAFVSLQKHENARNKLLPPTDYTPAAKALTAFFLNTAQAPVLAHNQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCE VQLYTDGEKKFAALFRDIEAAKDYIYVEYYTIYNDELGNQFQQLLIKKAKEGVVVKVLYD EEEEECCHHHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEEEC AWGSMGATAKWWRRLTDVGGQAESYFSSKHPITDFRLNYRDHRKIVVIDDHVGYIGGFNV CCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCEECCCCC GDQYVSRKPKFGYWRDTHLRIIGNTIYALKIRFTMDWNATVSKKDEIAYSVEQDSADSVT CHHHHCCCCCCCCCCCCEEEEEECEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCC ADSLTAGATPIQIVASGPDRPTQQIKLGYTKLITSATKSVWIQSPYLVPDDTVIDALVSA CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHH AMSGIDVRIMIPDMPDHPFIFRATQYYANYLTRAGVKIYHYEHGFMHAKTVVVDNAIASV HHCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCEEEEEEECCCEEEEEEEEHHHHHHC GSANFDIRSFKLNFEINAFIYDRKVASSLGQIFEADMARSYLLTPELIAKQSSWLRFKQD CCCCCEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH FSRLLSPIL HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]