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The map label for this gene is ypiA [H]

Identifier: 116494868

GI number: 116494868

Start: 1370266

End: 1371534

Strand: Direct

Name: ypiA [H]

Synonym: LSEI_1382

Alternate gene names: 116494868

Gene position: 1370266-1371534 (Clockwise)

Preceding gene: 116494867

Following gene: 116494870

Centisome position: 47.33

GC content: 48.46

Gene sequence:

>1269_bases
ATGAGTTACGCAAAAGAAATGCTTGATGCCATTGAAGCTGGCCAGATGGAAACGGCGAAGCAGCTATTCACCCAAGTATT
GGCCCACGATGACGACGAAACCCAATACAACCTTGCCGAAGAACTGTATGCGCTTGGGTTCAACGGTCAGGCTAAGCGGC
TTTATCAAGGGCTCCTAGGGCGATATCCTGACCAAGGCGATCTGGCGACGGCTTTAGCTGATATTGCAGTTTCTGACGGA
GATACAGACGCCGCCTTGAATTATCTTAGTCGCATTCAGCCAGGTGATCCTGCCTATGTTCAAAGTCTGGTGAGCGCTGC
CGACGTCTATCAAACACTTGGTTTATATGAGGTTAGTGAGCAAAAACTGCTTGAGGCGAAGCGATTGGCGCCAGACGAGC
CGGTGGTGACCTTCGCTTTAGGCGAATTCTATTTTGACTGGGGTCATTTTGCCGAGGCCATTAGTGCTTATAACGAGCTG
CTAGCGGCCGGTACAACTGAACTTGCTGGGGTTAACATCGAAGCACGGTTGGCGGCCAGTTTAGCGCAAACAGGGCAGTA
TGAAGACGCAGTGGCTGCTTATGAAGATGTCGGTGTTGATGCACTGGATCTCAATGGCCGGTTCGAATTAGGTGGCTTGT
ATTTACAACTTGATGATCCGGCTAAAGCGATCACCAATCTTCAAGCCGTGATTGACAGTGATCCAAGTTACGCCAATGCG
TATTTGCCACTTGCTCGTGCTTATGAGGCCCAGAATCAGCCTGACAAGGCCTTAGACACGGTTCAAGCCGGCGTCATGGT
CGATGATACGAACCCAACGCTATATGCCTTAGGCGGCAAATTAGCGCTTAGTGAAGACAATGTCAAATTAGCCGAGACGT
ATTTACAAAAGGCCTTGGCGATTGATCCGGAAGATCAAGGTAATATGCTCGCTTGGAGCAACTTTTTGGTGCAGGAAGAG
CGTGATCAAGAAAATGTTGACTTTCTTGACCAAATCGATCGTAGTGGTGATGTTGACCCACAAATTTATTGGAATATGGC
TAAAAGCTACGATCGGTTGGAGAATATTAAAAAAGCCCGTGAGAATTACCTTTTAGCGTTCAATCGCTTTCAGGATTCCC
CGGACTTTCTCCACGATATCATTGATTTCTTCCAGTCGACTGGTGCTCGCGCCGAATTGAAAGCCGCTTTAGTGCGATAT
TTGAAACTGGTACCTACTGACGACGAGATGCAGGCCCGTTTGGATGAACTCAACGCCGAGACGGATTAA

Upstream 100 bases:

>100_bases
TTTTGATGCTCATCAGTTCGGAATCAGCAAAACGCAATGTTAAACTAGCAGTAACGACAATCTTTAGGCTTTTTATAAAA
TGAAATCAACGGAGGCAGCC

Downstream 100 bases:

>100_bases
TCGTTGCGAATCAATGACCAAATAGTAGTCGGCGGCGTTTTTTCTGGTAGGTGAAGCCTTCGCCCAAGGCCTCATGGACA
TCAAGGATGCTGATGAAGGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSYAKEMLDAIEAGQMETAKQLFTQVLAHDDDETQYNLAEELYALGFNGQAKRLYQGLLGRYPDQGDLATALADIAVSDG
DTDAALNYLSRIQPGDPAYVQSLVSAADVYQTLGLYEVSEQKLLEAKRLAPDEPVVTFALGEFYFDWGHFAEAISAYNEL
LAAGTTELAGVNIEARLAASLAQTGQYEDAVAAYEDVGVDALDLNGRFELGGLYLQLDDPAKAITNLQAVIDSDPSYANA
YLPLARAYEAQNQPDKALDTVQAGVMVDDTNPTLYALGGKLALSEDNVKLAETYLQKALAIDPEDQGNMLAWSNFLVQEE
RDQENVDFLDQIDRSGDVDPQIYWNMAKSYDRLENIKKARENYLLAFNRFQDSPDFLHDIIDFFQSTGARAELKAALVRY
LKLVPTDDEMQARLDELNAETD

Sequences:

>Translated_422_residues
MSYAKEMLDAIEAGQMETAKQLFTQVLAHDDDETQYNLAEELYALGFNGQAKRLYQGLLGRYPDQGDLATALADIAVSDG
DTDAALNYLSRIQPGDPAYVQSLVSAADVYQTLGLYEVSEQKLLEAKRLAPDEPVVTFALGEFYFDWGHFAEAISAYNEL
LAAGTTELAGVNIEARLAASLAQTGQYEDAVAAYEDVGVDALDLNGRFELGGLYLQLDDPAKAITNLQAVIDSDPSYANA
YLPLARAYEAQNQPDKALDTVQAGVMVDDTNPTLYALGGKLALSEDNVKLAETYLQKALAIDPEDQGNMLAWSNFLVQEE
RDQENVDFLDQIDRSGDVDPQIYWNMAKSYDRLENIKKARENYLLAFNRFQDSPDFLHDIIDFFQSTGARAELKAALVRY
LKLVPTDDEMQARLDELNAETD
>Mature_421_residues
SYAKEMLDAIEAGQMETAKQLFTQVLAHDDDETQYNLAEELYALGFNGQAKRLYQGLLGRYPDQGDLATALADIAVSDGD
TDAALNYLSRIQPGDPAYVQSLVSAADVYQTLGLYEVSEQKLLEAKRLAPDEPVVTFALGEFYFDWGHFAEAISAYNELL
AAGTTELAGVNIEARLAASLAQTGQYEDAVAAYEDVGVDALDLNGRFELGGLYLQLDDPAKAITNLQAVIDSDPSYANAY
LPLARAYEAQNQPDKALDTVQAGVMVDDTNPTLYALGGKLALSEDNVKLAETYLQKALAIDPEDQGNMLAWSNFLVQEER
DQENVDFLDQIDRSGDVDPQIYWNMAKSYDRLENIKKARENYLLAFNRFQDSPDFLHDIIDFFQSTGARAELKAALVRYL
KLVPTDDEMQARLDELNAETD

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 46691; Mature: 46560

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAKEMLDAIEAGQMETAKQLFTQVLAHDDDETQYNLAEELYALGFNGQAKRLYQGLLG
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
RYPDQGDLATALADIAVSDGDTDAALNYLSRIQPGDPAYVQSLVSAADVYQTLGLYEVSE
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
QKLLEAKRLAPDEPVVTFALGEFYFDWGHFAEAISAYNELLAAGTTELAGVNIEARLAAS
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH
LAQTGQYEDAVAAYEDVGVDALDLNGRFELGGLYLQLDDPAKAITNLQAVIDSDPSYANA
HHHCCCCHHHHHHHHHCCCEEEECCCEEEECEEEEEECCHHHHHHHHHHHHCCCCCCCHH
YLPLARAYEAQNQPDKALDTVQAGVMVDDTNPTLYALGGKLALSEDNVKLAETYLQKALA
HHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCEEEEECCEEEECCCCHHHHHHHHHHHHC
IDPEDQGNMLAWSNFLVQEERDQENVDFLDQIDRSGDVDPQIYWNMAKSYDRLENIKKAR
CCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ENYLLAFNRFQDSPDFLHDIIDFFQSTGARAELKAALVRYLKLVPTDDEMQARLDELNAE
HHHEEEEHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TD
CC
>Mature Secondary Structure 
SYAKEMLDAIEAGQMETAKQLFTQVLAHDDDETQYNLAEELYALGFNGQAKRLYQGLLG
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
RYPDQGDLATALADIAVSDGDTDAALNYLSRIQPGDPAYVQSLVSAADVYQTLGLYEVSE
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
QKLLEAKRLAPDEPVVTFALGEFYFDWGHFAEAISAYNELLAAGTTELAGVNIEARLAAS
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH
LAQTGQYEDAVAAYEDVGVDALDLNGRFELGGLYLQLDDPAKAITNLQAVIDSDPSYANA
HHHCCCCHHHHHHHHHCCCEEEECCCEEEECEEEEEECCHHHHHHHHHHHHCCCCCCCHH
YLPLARAYEAQNQPDKALDTVQAGVMVDDTNPTLYALGGKLALSEDNVKLAETYLQKALA
HHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCEEEEECCEEEECCCCHHHHHHHHHHHHC
IDPEDQGNMLAWSNFLVQEERDQENVDFLDQIDRSGDVDPQIYWNMAKSYDRLENIKKAR
CCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ENYLLAFNRFQDSPDFLHDIIDFFQSTGARAELKAALVRYLKLVPTDDEMQARLDELNAE
HHHEEEEHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]