| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is fmnP [H]
Identifier: 116494859
GI number: 116494859
Start: 1361874
End: 1362452
Strand: Direct
Name: fmnP [H]
Synonym: LSEI_1373
Alternate gene names: 116494859
Gene position: 1361874-1362452 (Clockwise)
Preceding gene: 116494858
Following gene: 116494861
Centisome position: 47.04
GC content: 48.53
Gene sequence:
>579_bases ATGGCAAGTAGTTCCAAGGTTCACCGTTTGGTTGGTATCGCGTTGTTAGCGGCGATCGGGTATGTTTTGATGATGTTTTC ATTTCCGATCATTCCTGCTTTCCCGTTCCTGAAGCTTGATCTATCAGATCTGGTTGTTTTGCTTGGTGGGTTATTATATG GCCCGGCTGGCGGGATCGGCGTTGCATTTATCCGGAGTCGTGTGCATTTTGCTTTAACAGGCGGCGGGGTCGTCAATTTA ATTGGTGATCTGGCAGCTTTCATTGCGAGCGTTGGGTTCCTGCTTCCAGTTGTTTACACGATTCGTGGCAAGCACAGCTT GTTGCGGCAAATTGAAGGTCTGGTACTAGGTACCGCAAGCCTGACAGTTGTCATGAGTGTGCTCAATTGGCTGGTGATCA CGCCGATGTACATGGCGGTCTTCAATTTTAACCTTGGTATGTCGCTGACGCGTTACGTTTTAATCGGCGTTGTACCATTC AACTTAATTAAAGGAATTGTGGTCTCGGTTGCATTCTTCGCGATCGCCAAGGCCTTGGCACCGTGGTTAGCTCGGCGTGA GATTCAACCTAGTCATTAA
Upstream 100 bases:
>100_bases GGGGCTTTTTTGAATCTACATTCAATCAAGACCTATTCCCCCTGAAGGAGGAATAGGTCTTTTTAAGTTCCGGAAGACGG CCTCACGGAGGTAATGTTTT
Downstream 100 bases:
>100_bases TGATTTGATCAATCAACTAAAAAACATCCGTCAGCTTTGTTAAGCGACGGATGTTTTTCTTTAGCGTAAAATCGATTGTC TTGCGACGAATCACGTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: FMN permease [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MASSSKVHRLVGIALLAAIGYVLMMFSFPIIPAFPFLKLDLSDLVVLLGGLLYGPAGGIGVAFIRSRVHFALTGGGVVNL IGDLAAFIASVGFLLPVVYTIRGKHSLLRQIEGLVLGTASLTVVMSVLNWLVITPMYMAVFNFNLGMSLTRYVLIGVVPF NLIKGIVVSVAFFAIAKALAPWLARREIQPSH
Sequences:
>Translated_192_residues MASSSKVHRLVGIALLAAIGYVLMMFSFPIIPAFPFLKLDLSDLVVLLGGLLYGPAGGIGVAFIRSRVHFALTGGGVVNL IGDLAAFIASVGFLLPVVYTIRGKHSLLRQIEGLVLGTASLTVVMSVLNWLVITPMYMAVFNFNLGMSLTRYVLIGVVPF NLIKGIVVSVAFFAIAKALAPWLARREIQPSH >Mature_191_residues ASSSKVHRLVGIALLAAIGYVLMMFSFPIIPAFPFLKLDLSDLVVLLGGLLYGPAGGIGVAFIRSRVHFALTGGGVVNLI GDLAAFIASVGFLLPVVYTIRGKHSLLRQIEGLVLGTASLTVVMSVLNWLVITPMYMAVFNFNLGMSLTRYVLIGVVPFN LIKGIVVSVAFFAIAKALAPWLARREIQPSH
Specific function: Mediates riboflavin uptake, probably via a proton- symport mechanism. Can also transport roseoflavin [H]
COG id: COG3601
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009825 [H]
Pfam domain/function: PF07155 DUF1393 [H]
EC number: NA
Molecular weight: Translated: 20539; Mature: 20408
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSKVHRLVGIALLAAIGYVLMMFSFPIIPAFPFLKLDLSDLVVLLGGLLYGPAGGIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCHHH VAFIRSRVHFALTGGGVVNLIGDLAAFIASVGFLLPVVYTIRGKHSLLRQIEGLVLGTAS HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LTVVMSVLNWLVITPMYMAVFNFNLGMSLTRYVLIGVVPFNLIKGIVVSVAFFAIAKALA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PWLARREIQPSH HHHHHCCCCCCC >Mature Secondary Structure ASSSKVHRLVGIALLAAIGYVLMMFSFPIIPAFPFLKLDLSDLVVLLGGLLYGPAGGIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCHHH VAFIRSRVHFALTGGGVVNLIGDLAAFIASVGFLLPVVYTIRGKHSLLRQIEGLVLGTAS HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LTVVMSVLNWLVITPMYMAVFNFNLGMSLTRYVLIGVVPFNLIKGIVVSVAFFAIAKALA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PWLARREIQPSH HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]