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The map label for this gene is 116494785

Identifier: 116494785

GI number: 116494785

Start: 1274678

End: 1275346

Strand: Direct

Name: 116494785

Synonym: LSEI_1294

Alternate gene names: NA

Gene position: 1274678-1275346 (Clockwise)

Preceding gene: 116494784

Following gene: 116494786

Centisome position: 44.03

GC content: 49.33

Gene sequence:

>669_bases
ATGGATTCAAAAATTTTAACCATGTTCAACCAAGGCAAGCATGAGGAGGCGATTCAAGCGGCAGTCAAAGCCATTGATGC
TGCCCCTGATGATCCGAAACGCTATGCGATGTTGGCAACAATGCTGATTAGTATCAAAGCGCTGGATCAGGCCGGTGAAT
TGCTGGCCAAAGCGCGCCAGCTTTTTCCAGAGGATCTGGAATTGCAATACACCGCTGGCTTGTTTGCGTATGCTCAAGCG
GACTTTGCGGCTGCAGTCTCATGGTTTGCCAAGGTTAGAACCGACCAGACTTTGAAAAATGATGCTACCTACATGTTGGC
TTTAAGCTACCAACAAGCTGGCCAGCCAACGAAGGCATTGGCGTTTGCATTAACGGCGCATGACTTGGCGCCAAAGCAGC
TTGATACCGCCCTTTTAGCAGCTGATTTGCTGATGGCAAACGATGTATTTGATGCAGCAGCCCGAGTGTTGAAACCATTG
TTGGCAACCGAACAGCCACAGGTTCTGTTCACGTACGGCATGGCACTGAGCGCCGCTGGTAAAGATGGCAGTCATTATTT
GAACAAGGCCAAGGCACTCGATCCAAAAGGGTATGATCAAAAAGCTAACATTGTCGCTGATATCAACCGATTCTTGCGAT
TGCAGGAGGGTCAAGATGGACACGCGTGA

Upstream 100 bases:

>100_bases
TTGCTGGATTGGAATGAAACCAGTTTCTTACCGGAACCGCCAAAAGCAACGGATACGATTTGAGTTGCTACGGCTGTCAA
CAACGAGATAAGAGGGTCAA

Downstream 100 bases:

>100_bases
GGAGACTGTCACCGGTCGGGTCAAAAGTATCTTTTTCCAGAATCCAACAAATTTTTTTAAAATTCTGCTGATCGAAATCT
CTGCGACGACTATCACCTGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDSKILTMFNQGKHEEAIQAAVKAIDAAPDDPKRYAMLATMLISIKALDQAGELLAKARQLFPEDLELQYTAGLFAYAQA
DFAAAVSWFAKVRTDQTLKNDATYMLALSYQQAGQPTKALAFALTAHDLAPKQLDTALLAADLLMANDVFDAAARVLKPL
LATEQPQVLFTYGMALSAAGKDGSHYLNKAKALDPKGYDQKANIVADINRFLRLQEGQDGHA

Sequences:

>Translated_222_residues
MDSKILTMFNQGKHEEAIQAAVKAIDAAPDDPKRYAMLATMLISIKALDQAGELLAKARQLFPEDLELQYTAGLFAYAQA
DFAAAVSWFAKVRTDQTLKNDATYMLALSYQQAGQPTKALAFALTAHDLAPKQLDTALLAADLLMANDVFDAAARVLKPL
LATEQPQVLFTYGMALSAAGKDGSHYLNKAKALDPKGYDQKANIVADINRFLRLQEGQDGHA
>Mature_222_residues
MDSKILTMFNQGKHEEAIQAAVKAIDAAPDDPKRYAMLATMLISIKALDQAGELLAKARQLFPEDLELQYTAGLFAYAQA
DFAAAVSWFAKVRTDQTLKNDATYMLALSYQQAGQPTKALAFALTAHDLAPKQLDTALLAADLLMANDVFDAAARVLKPL
LATEQPQVLFTYGMALSAAGKDGSHYLNKAKALDPKGYDQKANIVADINRFLRLQEGQDGHA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24105; Mature: 24105

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKILTMFNQGKHEEAIQAAVKAIDAAPDDPKRYAMLATMLISIKALDQAGELLAKARQ
CCCCEEEHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFPEDLELQYTAGLFAYAQADFAAAVSWFAKVRTDQTLKNDATYMLALSYQQAGQPTKAL
HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEHHHCCCCHHHH
AFALTAHDLAPKQLDTALLAADLLMANDVFDAAARVLKPLLATEQPQVLFTYGMALSAAG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCCC
KDGSHYLNKAKALDPKGYDQKANIVADINRFLRLQEGQDGHA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDSKILTMFNQGKHEEAIQAAVKAIDAAPDDPKRYAMLATMLISIKALDQAGELLAKARQ
CCCCEEEHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFPEDLELQYTAGLFAYAQADFAAAVSWFAKVRTDQTLKNDATYMLALSYQQAGQPTKAL
HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEHHHCCCCHHHH
AFALTAHDLAPKQLDTALLAADLLMANDVFDAAARVLKPLLATEQPQVLFTYGMALSAAG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCCC
KDGSHYLNKAKALDPKGYDQKANIVADINRFLRLQEGQDGHA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA