Click here to switch to the map view.

The map label for this gene is gpmB [H]

Identifier: 116494784

GI number: 116494784

Start: 1273978

End: 1274640

Strand: Direct

Name: gpmB [H]

Synonym: LSEI_1293

Alternate gene names: 116494784

Gene position: 1273978-1274640 (Clockwise)

Preceding gene: 116494783

Following gene: 116494785

Centisome position: 44.0

GC content: 47.96

Gene sequence:

>663_bases
GTGACGAAGTTGTATTTTGTACGTCATGGCAAAACAGAATGGAATAATCAAGGGCGTTATCAAGGCGCTAATGGGGACTC
GCCGTTATTGCCGGAGAGTTATGCGCAAATTAAGGCGTTGGCCGGTTATTTGCAAGGAATTCCTTTTATGCATGCTTATG
TCAGTCCATTAAAGCGTGCACGAACAACTGCCCAAACCTTGATTAAAGATTTGGATGAGTCAATTCCGTTGACCATTATG
CCAGCTTTGCGGGAGTTCAATCTCGGTAAAATGGAAGGGATGACGTTTACTGATGTAGGTAAGCATTTTCCTCAGGAGCT
GCATGCCTTTCGTCATGAACCGGCAGCCTATGATCCACGAAAAATACATGGGGAATCTTTTTCACAACTGATTAATCGGG
CTATTCCGGCGATCGTGGCGACTGTGGCCATGGATCGCACTGGTGAGGCTAATTTGCTGTACGTCAGCCACGGGGCCGCA
CTCGCTGCGGTGATTCAAAGTCTGTTGGGCACACCACTGGCGGATATTCGCAAAGACGGAGGTTTGACCAATAGCAGTGT
GACCATTTTGCACGCAGATGGACCGACCTTGCCGTTTACCTTGCTGGATTGGAATGAAACCAGTTTCTTACCGGAACCGC
CAAAAGCAACGGATACGATTTGA

Upstream 100 bases:

>100_bases
CTTCAAAATCTCGATAATGAAAGAGTTAAGATGCGAAAGGATAGTACGGTCATTGATTGGGACTTTTGAATCATTGGTCG
TGACTAAAGGGGATTGACTT

Downstream 100 bases:

>100_bases
GTTGCTACGGCTGTCAACAACGAGATAAGAGGGTCAAATGGATTCAAAAATTTTAACCATGTTCAACCAAGGCAAGCATG
AGGAGGCGATTCAAGCGGCA

Product: phosphoglycerate mutase family protein

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTKLYFVRHGKTEWNNQGRYQGANGDSPLLPESYAQIKALAGYLQGIPFMHAYVSPLKRARTTAQTLIKDLDESIPLTIM
PALREFNLGKMEGMTFTDVGKHFPQELHAFRHEPAAYDPRKIHGESFSQLINRAIPAIVATVAMDRTGEANLLYVSHGAA
LAAVIQSLLGTPLADIRKDGGLTNSSVTILHADGPTLPFTLLDWNETSFLPEPPKATDTI

Sequences:

>Translated_220_residues
MTKLYFVRHGKTEWNNQGRYQGANGDSPLLPESYAQIKALAGYLQGIPFMHAYVSPLKRARTTAQTLIKDLDESIPLTIM
PALREFNLGKMEGMTFTDVGKHFPQELHAFRHEPAAYDPRKIHGESFSQLINRAIPAIVATVAMDRTGEANLLYVSHGAA
LAAVIQSLLGTPLADIRKDGGLTNSSVTILHADGPTLPFTLLDWNETSFLPEPPKATDTI
>Mature_219_residues
TKLYFVRHGKTEWNNQGRYQGANGDSPLLPESYAQIKALAGYLQGIPFMHAYVSPLKRARTTAQTLIKDLDESIPLTIMP
ALREFNLGKMEGMTFTDVGKHFPQELHAFRHEPAAYDPRKIHGESFSQLINRAIPAIVATVAMDRTGEANLLYVSHGAAL
AAVIQSLLGTPLADIRKDGGLTNSSVTILHADGPTLPFTLLDWNETSFLPEPPKATDTI

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Homo sapiens, GI118582286, Length=168, Percent_Identity=30.952380952381, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1790856, Length=174, Percent_Identity=29.8850574712644, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786857, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25145314, Length=175, Percent_Identity=31.4285714285714, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324857, Length=172, Percent_Identity=31.9767441860465, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 24182; Mature: 24051

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLYFVRHGKTEWNNQGRYQGANGDSPLLPESYAQIKALAGYLQGIPFMHAYVSPLKRA
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RTTAQTLIKDLDESIPLTIMPALREFNLGKMEGMTFTDVGKHFPQELHAFRHEPAAYDPR
HHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
KIHGESFSQLINRAIPAIVATVAMDRTGEANLLYVSHGAALAAVIQSLLGTPLADIRKDG
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCC
GLTNSSVTILHADGPTLPFTLLDWNETSFLPEPPKATDTI
CCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKLYFVRHGKTEWNNQGRYQGANGDSPLLPESYAQIKALAGYLQGIPFMHAYVSPLKRA
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RTTAQTLIKDLDESIPLTIMPALREFNLGKMEGMTFTDVGKHFPQELHAFRHEPAAYDPR
HHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
KIHGESFSQLINRAIPAIVATVAMDRTGEANLLYVSHGAALAAVIQSLLGTPLADIRKDG
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCC
GLTNSSVTILHADGPTLPFTLLDWNETSFLPEPPKATDTI
CCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA