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The map label for this gene is yniC [C]

Identifier: 116494745

GI number: 116494745

Start: 1233338

End: 1233982

Strand: Direct

Name: yniC [C]

Synonym: LSEI_1253

Alternate gene names: 116494745

Gene position: 1233338-1233982 (Clockwise)

Preceding gene: 116494744

Following gene: 116494746

Centisome position: 42.6

GC content: 50.7

Gene sequence:

>645_bases
ATGACGACTACCATTATTTTTGATCTTGATGGCACCTTGGTGAACACCGAGGCACTTTATCTCAAAAGCAATGTCAAAGC
TGCCGCTCAACTGGGATTGCATCGCACTGAGGCTGATTTTCGGCCGTTAGTGGGTGCAGCCGGCCCCAGCGAGGCCAAAG
TGATTGCCGACATGATTGGCGCCGAACATGCTGCTTGGTTTCAAAAGTTTTCGACGGCGGATGTTCTTGATCAAATTCAA
GGCGGCGCAGATTTTGTTTTGCCAAATGTACAGCCAACTTTAGCGGCATTGACAACGGCAGGTTATCCATTGGCGCTGGC
GACGAGTAGTCCGCGGCATTATGTGGATGTTGTCTTGGCAGCAACCGGCTGGCAGTGGCAGTTTCACCCGATTTTGACTG
GCAGCGATGTACAGGCGCATAAGCCTGATCCTGAGATGTACGAAGCAATGAAAGTCAAGCTGGGAAATGTGCCAGCTGTT
GTCGTTGAAGATACCCATGTTGGTGTTGAAGCGGCTGTTGGAGCTGGCCTGCCAGCGGTCATGATTCCTGGTATTGCGCA
AAAACCCGATTCAAAAGCGACCGCGATTCTGTCATCAATCAGCGAATTACCAGCTTGGTTGAAAAATCAGCCTGCGTTTG
CGTAA

Upstream 100 bases:

>100_bases
TCTGCGCCTGCGAACGCGTTTCAGAAGAGCCGAGACCAGCTCAATTAGAACAGCGCGTGAGCAGTTTTTTTGTGTCACGA
GCGACTTTAAGGAGGAGACC

Downstream 100 bases:

>100_bases
TTTTCTAATGACACCGATAACTGATCGGTGAAGTGAGAAAATGCCAACAGGGGGAATTTTCATGGCAAATGCAGCAGAAT
TGCCACGTGAACGGTTATTA

Product: HAD family sugar phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTTTIIFDLDGTLVNTEALYLKSNVKAAAQLGLHRTEADFRPLVGAAGPSEAKVIADMIGAEHAAWFQKFSTADVLDQIQ
GGADFVLPNVQPTLAALTTAGYPLALATSSPRHYVDVVLAATGWQWQFHPILTGSDVQAHKPDPEMYEAMKVKLGNVPAV
VVEDTHVGVEAAVGAGLPAVMIPGIAQKPDSKATAILSSISELPAWLKNQPAFA

Sequences:

>Translated_214_residues
MTTTIIFDLDGTLVNTEALYLKSNVKAAAQLGLHRTEADFRPLVGAAGPSEAKVIADMIGAEHAAWFQKFSTADVLDQIQ
GGADFVLPNVQPTLAALTTAGYPLALATSSPRHYVDVVLAATGWQWQFHPILTGSDVQAHKPDPEMYEAMKVKLGNVPAV
VVEDTHVGVEAAVGAGLPAVMIPGIAQKPDSKATAILSSISELPAWLKNQPAFA
>Mature_213_residues
TTTIIFDLDGTLVNTEALYLKSNVKAAAQLGLHRTEADFRPLVGAAGPSEAKVIADMIGAEHAAWFQKFSTADVLDQIQG
GADFVLPNVQPTLAALTTAGYPLALATSSPRHYVDVVLAATGWQWQFHPILTGSDVQAHKPDPEMYEAMKVKLGNVPAVV
VEDTHVGVEAAVGAGLPAVMIPGIAQKPDSKATAILSSISELPAWLKNQPAFA

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=231, Percent_Identity=29.004329004329, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI20129151, Length=231, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 22564; Mature: 22433

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTIIFDLDGTLVNTEALYLKSNVKAAAQLGLHRTEADFRPLVGAAGPSEAKVIADMIG
CCEEEEEECCCCEECCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
AEHAAWFQKFSTADVLDQIQGGADFVLPNVQPTLAALTTAGYPLALATSSPRHYVDVVLA
CHHHHHHHHCCHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEE
ATGWQWQFHPILTGSDVQAHKPDPEMYEAMKVKLGNVPAVVVEDTHVGVEAAVGAGLPAV
ECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCE
MIPGIAQKPDSKATAILSSISELPAWLKNQPAFA
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTTIIFDLDGTLVNTEALYLKSNVKAAAQLGLHRTEADFRPLVGAAGPSEAKVIADMIG
CEEEEEECCCCEECCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
AEHAAWFQKFSTADVLDQIQGGADFVLPNVQPTLAALTTAGYPLALATSSPRHYVDVVLA
CHHHHHHHHCCHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEE
ATGWQWQFHPILTGSDVQAHKPDPEMYEAMKVKLGNVPAVVVEDTHVGVEAAVGAGLPAV
ECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCE
MIPGIAQKPDSKATAILSSISELPAWLKNQPAFA
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2105929 [H]