| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is fgs [H]
Identifier: 116494744
GI number: 116494744
Start: 1231867
End: 1233144
Strand: Direct
Name: fgs [H]
Synonym: LSEI_1252
Alternate gene names: 116494744
Gene position: 1231867-1233144 (Clockwise)
Preceding gene: 116494743
Following gene: 116494745
Centisome position: 42.55
GC content: 50.78
Gene sequence:
>1278_bases ATGGACTACACCGAAAGTGTCGCGTATATTCATTCGTTTCCGCGCTTGGCCAAAACTGGCGATCATCAGCGCATTCTCAC CTTGCTGCATGCCTTGGGTGACCCGCAAAAACGAGGCCATTATATTCATGTCACTGGGACAAATGGTAAAGGCTCAGCCG CCAATGCCATTGCCCATATCCTTGAAGCAAGCGGTTTGAGTGTCGGTTTGTATACATCACCGTTCATTATGCGGTTTAAT GAGCGCATGATGATTGATCATCAGCCCATTCCTGATGCTGAGCTTGTTAAAGCGGTCGCTGTCGGACAACAGGCCTTAAC CCAGCTGCGGCAAGCGACACCAGATTTCGGGGTCACGGAATTCGAATTTATCACGGCTCTGGCCTTTTGGTATTTTGATC AAAAACAGGTGGATTTGGCAGTGATTGAGGTGGGGATTGGTGGCGACACGGATTCCACCAATGTGATCACGCCGGTTGTA AGTGTGCTGACTGAGGTAGCTTTAGATCATCAAAAACTGCTTGGCGATACGATTACTGAGATTGCCACGCATAAAGCTGG CATCATTAAACCGCACGTCCCGGTTGTGACTGGCAATTTGGTACCAGATGCTGATGCTGTTGTGGCGGCAAAGGTTGCAG CAACAGCTAGCACGTGGTTGCGATTTGACCGCGACTTTTCCGTTCCCAAAGCGCGCTTGCATGGCTGGGGTCAGCGATTG ACTTATGCCGACAAGGATGGTGAGCTGACAGACATAGATATACCGCTGGTTGGTGATTACCAACAGCGAAATATGGCAAT TGCGATTCAGACGGCAAAAGTCTATGCCTCTGCAACGAATTGGCCGTTGAAGTCGCAGGAAATTCGCCAAGGGCTAGCGG CCAGTCGATGGCCGGCGCGATTAGAGAAGTTAAGTGACGAACCACTGATTGTGATTGACGGCGCCCATAATCCGGACGGC ATCAAGGGATTAATTGCCGCATTGCACCAGCTCTTTAAGCAACCGGTGACAGTGATTGCTGGCATTTTGGCTGACAAGGA TTATCACACCATGGCCGATGCACTAACGAAGGCATTTCATACCGTGTATCTCGTACCGGTACCAGGCAATGCCCGGGCTT TGCCTGAGGCTGGGTATGCAGCCTTGCATGAAGGCCAATTAAAGGATTCCTGGCAAGAAGCAATGGCCGCGAGCCTTGTT GACGATCCGGATCAGCCAATCATCTTAACCGGCTCGCTTTATCTGGCCGCTGATGTTCGACAAACTTTAAGAGCGTGA
Upstream 100 bases:
>100_bases ACTTCTCCAGAATTTCTGGTATCATGAAACTTATGAAGCTAGCACTTGCACGCTGGCATAGAAACCGGGCGCGTTCATGC CCTGAGGAAAGAAGTTAACC
Downstream 100 bases:
>100_bases GCCAACCCGGGTAGAAACCGGAGTGTAAGCGGCCTTGAAGTCTAAATGGCTGATCCTTGGCCATTTAGACTTCAAGGTCC TTATGTGCAGGTTTCTGCGC
Product: folylpolyglutamate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MDYTESVAYIHSFPRLAKTGDHQRILTLLHALGDPQKRGHYIHVTGTNGKGSAANAIAHILEASGLSVGLYTSPFIMRFN ERMMIDHQPIPDAELVKAVAVGQQALTQLRQATPDFGVTEFEFITALAFWYFDQKQVDLAVIEVGIGGDTDSTNVITPVV SVLTEVALDHQKLLGDTITEIATHKAGIIKPHVPVVTGNLVPDADAVVAAKVAATASTWLRFDRDFSVPKARLHGWGQRL TYADKDGELTDIDIPLVGDYQQRNMAIAIQTAKVYASATNWPLKSQEIRQGLAASRWPARLEKLSDEPLIVIDGAHNPDG IKGLIAALHQLFKQPVTVIAGILADKDYHTMADALTKAFHTVYLVPVPGNARALPEAGYAALHEGQLKDSWQEAMAASLV DDPDQPIILTGSLYLAADVRQTLRA
Sequences:
>Translated_425_residues MDYTESVAYIHSFPRLAKTGDHQRILTLLHALGDPQKRGHYIHVTGTNGKGSAANAIAHILEASGLSVGLYTSPFIMRFN ERMMIDHQPIPDAELVKAVAVGQQALTQLRQATPDFGVTEFEFITALAFWYFDQKQVDLAVIEVGIGGDTDSTNVITPVV SVLTEVALDHQKLLGDTITEIATHKAGIIKPHVPVVTGNLVPDADAVVAAKVAATASTWLRFDRDFSVPKARLHGWGQRL TYADKDGELTDIDIPLVGDYQQRNMAIAIQTAKVYASATNWPLKSQEIRQGLAASRWPARLEKLSDEPLIVIDGAHNPDG IKGLIAALHQLFKQPVTVIAGILADKDYHTMADALTKAFHTVYLVPVPGNARALPEAGYAALHEGQLKDSWQEAMAASLV DDPDQPIILTGSLYLAADVRQTLRA >Mature_425_residues MDYTESVAYIHSFPRLAKTGDHQRILTLLHALGDPQKRGHYIHVTGTNGKGSAANAIAHILEASGLSVGLYTSPFIMRFN ERMMIDHQPIPDAELVKAVAVGQQALTQLRQATPDFGVTEFEFITALAFWYFDQKQVDLAVIEVGIGGDTDSTNVITPVV SVLTEVALDHQKLLGDTITEIATHKAGIIKPHVPVVTGNLVPDADAVVAAKVAATASTWLRFDRDFSVPKARLHGWGQRL TYADKDGELTDIDIPLVGDYQQRNMAIAIQTAKVYASATNWPLKSQEIRQGLAASRWPARLEKLSDEPLIVIDGAHNPDG IKGLIAALHQLFKQPVTVIAGILADKDYHTMADALTKAFHTVYLVPVPGNARALPEAGYAALHEGQLKDSWQEAMAASLV DDPDQPIILTGSLYLAADVRQTLRA
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=320, Percent_Identity=31.25, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI66932984, Length=320, Percent_Identity=31.25, Blast_Score=133, Evalue=3e-31, Organism=Escherichia coli, GI1788654, Length=390, Percent_Identity=31.025641025641, Blast_Score=159, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17553148, Length=354, Percent_Identity=27.4011299435028, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI71984923, Length=354, Percent_Identity=27.4011299435028, Blast_Score=131, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17553150, Length=354, Percent_Identity=27.4011299435028, Blast_Score=131, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6323760, Length=425, Percent_Identity=28.9411764705882, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6324815, Length=339, Percent_Identity=27.7286135693215, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI24641571, Length=286, Percent_Identity=30.4195804195804, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24581568, Length=171, Percent_Identity=29.2397660818713, Blast_Score=85, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 46177; Mature: 46177
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS01011 FOLYLPOLYGLU_SYNT_1 ; PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYTESVAYIHSFPRLAKTGDHQRILTLLHALGDPQKRGHYIHVTGTNGKGSAANAIAHI CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHHHHHHHH LEASGLSVGLYTSPFIMRFNERMMIDHQPIPDAELVKAVAVGQQALTQLRQATPDFGVTE HHHCCCEEEEECCCCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH FEFITALAFWYFDQKQVDLAVIEVGIGGDTDSTNVITPVVSVLTEVALDHQKLLGDTITE HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IATHKAGIIKPHVPVVTGNLVPDADAVVAAKVAATASTWLRFDRDFSVPKARLHGWGQRL HHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC TYADKDGELTDIDIPLVGDYQQRNMAIAIQTAKVYASATNWPLKSQEIRQGLAASRWPAR EEECCCCCEEEEECCEECCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHH LEKLSDEPLIVIDGAHNPDGIKGLIAALHQLFKQPVTVIAGILADKDYHTMADALTKAFH HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TVYLVPVPGNARALPEAGYAALHEGQLKDSWQEAMAASLVDDPDQPIILTGSLYLAADVR EEEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCEEEHHHHH QTLRA HHHCC >Mature Secondary Structure MDYTESVAYIHSFPRLAKTGDHQRILTLLHALGDPQKRGHYIHVTGTNGKGSAANAIAHI CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHHHHHHHH LEASGLSVGLYTSPFIMRFNERMMIDHQPIPDAELVKAVAVGQQALTQLRQATPDFGVTE HHHCCCEEEEECCCCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH FEFITALAFWYFDQKQVDLAVIEVGIGGDTDSTNVITPVVSVLTEVALDHQKLLGDTITE HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IATHKAGIIKPHVPVVTGNLVPDADAVVAAKVAATASTWLRFDRDFSVPKARLHGWGQRL HHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC TYADKDGELTDIDIPLVGDYQQRNMAIAIQTAKVYASATNWPLKSQEIRQGLAASRWPAR EEECCCCCEEEEECCEECCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHH LEKLSDEPLIVIDGAHNPDGIKGLIAALHQLFKQPVTVIAGILADKDYHTMADALTKAFH HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TVYLVPVPGNARALPEAGYAALHEGQLKDSWQEAMAASLVDDPDQPIILTGSLYLAADVR EEEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCEEEHHHHH QTLRA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2105929; 9618466 [H]