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The map label for this gene is 116494715

Identifier: 116494715

GI number: 116494715

Start: 1199137

End: 1199994

Strand: Direct

Name: 116494715

Synonym: LSEI_1221

Alternate gene names: NA

Gene position: 1199137-1199994 (Clockwise)

Preceding gene: 116494714

Following gene: 116494722

Centisome position: 41.42

GC content: 46.62

Gene sequence:

>858_bases
ATGACCAAAAAAATTGCAATTGTCGTTGATTCGGGTTCTGATGTCCCTCAAAGTGTTCTTGATGAAAATAAAAATATTGC
AGTCGTACCGCTGAATATTACTATGAATGGGCATAATTACCTTGATGCAGTTGATATCACACCGGATGAATTTTATTCGG
CGCTAGCAACGGCAGAAACATTGCCGCAGACTTCAAGTCCGTCACCGCAAGCTGCCAAAGAGGCGATGGATAGGCTGTTT
GCGGCTGGTTATCAGCAAATCCTCGGTATCACAATTTCGAGCGCGTTGTCTGTGACGAACAACGTCTTTCAATTGGCCGC
GCAAGATTTTCCCGCTGACACCGTAACCATTCTTGACACAAAAAGCATCGGCATTGGCAGTGGCATCCAAGCAGCCTATG
CCGCATCATTGATCAATGCAGGGGAATCTTTTCAGGACGTGATTGCAAAAGTTCGTGCCTCAATCGTCAAAAGTCGGATT
TATTTCTACGTGCCAACCTTGAAGTACCTCAGTGCCGGCGGTCGAATCGGCCGAGTGGCAGGCCTTGTCGGTTCGGTTTT
GCACATTAAACCGGTGATCTCATGTGATCCAGAAGGCGTCTACTACCCTCTTTTTAAGGCGCGATCTGAAGAAAAAGCGA
TTCGGAAATTGGTTGAACAAGTCAAAACGGATTGCTTAAATAGCGCTCATTATCGTCTAGGAGTTGCCCATGGTCAAAAT
CCAGCTTTGGTTAAAAAGTTGGCAGAAAAATTGCGCGAAGTGACTGGTCGACCGGTTGATTTTATTGGTGAGATCTCGCC
GTCATTGGGGGTTCATACAGGACCGGGACTGATTGGGGCTACGGTTCAGTCGTATTAA

Upstream 100 bases:

>100_bases
GAATATTCACATGAACGAAAAAGATATATGTGGTGAACCCATTTACATCTAGTCTTAGAAACCATATAATATGGATATTA
AAGCCGCAAGGAGGCAGAAC

Downstream 100 bases:

>100_bases
GCGTCACGAGAATGAGCCATGCTTCATAGACTTGACCTGAACTGACATCAAATTAACAATGCCCGTTTCTCAATATGTTG
GGAAGCGGGCATTGTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTKKIAIVVDSGSDVPQSVLDENKNIAVVPLNITMNGHNYLDAVDITPDEFYSALATAETLPQTSSPSPQAAKEAMDRLF
AAGYQQILGITISSALSVTNNVFQLAAQDFPADTVTILDTKSIGIGSGIQAAYAASLINAGESFQDVIAKVRASIVKSRI
YFYVPTLKYLSAGGRIGRVAGLVGSVLHIKPVISCDPEGVYYPLFKARSEEKAIRKLVEQVKTDCLNSAHYRLGVAHGQN
PALVKKLAEKLREVTGRPVDFIGEISPSLGVHTGPGLIGATVQSY

Sequences:

>Translated_285_residues
MTKKIAIVVDSGSDVPQSVLDENKNIAVVPLNITMNGHNYLDAVDITPDEFYSALATAETLPQTSSPSPQAAKEAMDRLF
AAGYQQILGITISSALSVTNNVFQLAAQDFPADTVTILDTKSIGIGSGIQAAYAASLINAGESFQDVIAKVRASIVKSRI
YFYVPTLKYLSAGGRIGRVAGLVGSVLHIKPVISCDPEGVYYPLFKARSEEKAIRKLVEQVKTDCLNSAHYRLGVAHGQN
PALVKKLAEKLREVTGRPVDFIGEISPSLGVHTGPGLIGATVQSY
>Mature_284_residues
TKKIAIVVDSGSDVPQSVLDENKNIAVVPLNITMNGHNYLDAVDITPDEFYSALATAETLPQTSSPSPQAAKEAMDRLFA
AGYQQILGITISSALSVTNNVFQLAAQDFPADTVTILDTKSIGIGSGIQAAYAASLINAGESFQDVIAKVRASIVKSRIY
FYVPTLKYLSAGGRIGRVAGLVGSVLHIKPVISCDPEGVYYPLFKARSEEKAIRKLVEQVKTDCLNSAHYRLGVAHGQNP
ALVKKLAEKLREVTGRPVDFIGEISPSLGVHTGPGLIGATVQSY

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30346; Mature: 30215

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKIAIVVDSGSDVPQSVLDENKNIAVVPLNITMNGHNYLDAVDITPDEFYSALATAET
CCCEEEEEEECCCCCCHHHHCCCCCEEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHH
LPQTSSPSPQAAKEAMDRLFAAGYQQILGITISSALSVTNNVFQLAAQDFPADTVTILDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
KSIGIGSGIQAAYAASLINAGESFQDVIAKVRASIVKSRIYFYVPTLKYLSAGGRIGRVA
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHCCCCHHHHH
GLVGSVLHIKPVISCDPEGVYYPLFKARSEEKAIRKLVEQVKTDCLNSAHYRLGVAHGQN
HHHHHHHHCCEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCC
PALVKKLAEKLREVTGRPVDFIGEISPSLGVHTGPGLIGATVQSY
HHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
TKKIAIVVDSGSDVPQSVLDENKNIAVVPLNITMNGHNYLDAVDITPDEFYSALATAET
CCEEEEEEECCCCCCHHHHCCCCCEEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHH
LPQTSSPSPQAAKEAMDRLFAAGYQQILGITISSALSVTNNVFQLAAQDFPADTVTILDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
KSIGIGSGIQAAYAASLINAGESFQDVIAKVRASIVKSRIYFYVPTLKYLSAGGRIGRVA
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHCCCCHHHHH
GLVGSVLHIKPVISCDPEGVYYPLFKARSEEKAIRKLVEQVKTDCLNSAHYRLGVAHGQN
HHHHHHHHCCEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCC
PALVKKLAEKLREVTGRPVDFIGEISPSLGVHTGPGLIGATVQSY
HHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]