| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494710
Identifier: 116494710
GI number: 116494710
Start: 1196200
End: 1197093
Strand: Direct
Name: 116494710
Synonym: LSEI_1216
Alternate gene names: NA
Gene position: 1196200-1197093 (Clockwise)
Preceding gene: 116494709
Following gene: 116494711
Centisome position: 41.32
GC content: 44.07
Gene sequence:
>894_bases ATGCAAAGTAAAGCAGGGACGGCCGATCAGGGATGGGCTTTAGAAGAAAAACTGGACGAATTTAATCGGCATCAGCATCC CTTCAACGGATCAGGTGCCGACGAGTCATTTGCGTACGTCATCAAAAAAGGTGACCAAGTGGTTGGCGGTGTTGCGGCGA GTTCGGATGACAATGCGATTGGTTATATCGAGTTGCTCTGGGTAGATGAAACCATGCGGCGACAGGGGTTAGGGCGTGCC TTGTTAGCAACTGTCGAACAAGCCTTGCAAGCTGCTGGTTGCAAAAGGGTGAGATTAGAAACTTTTGATTATCAAGCACC AGCATTTTATCTTGAAAACGGCTATCACGAATTTGGCAAACTTAATTACGACTATGCCGGTGTGATTGAATATTTTTTCG TCAAAATGTTATCGCTGCCAATCGGCTACAACATACCACCGGCTTTTTCGATTGAAGCAGCTGAAGACCTAGCGATGGAA GCCATTGAGAATAAACTTCATGCCTACAATGTGAAAATGAAACCACTACTGCAACAAAAAATGGGTGTGACTTTTACTTT TTTAGCGGAAGAAAATGGCCAATGTATTGGCGGCATTTTCGGTTACAGCACCATGTATAAAATCGGCTATATTGAAAGTC TATGGGTAGCTGAAACGAACAGACATGCAGGTGTTGGCACGGCTCTCGTTGATGTTTTAGTAAATGCCTTAAAAGATTTT GGCTGTCCGATTGTTCACCTCGATACCATGTCGTATCAAGGTGCGGCGTTTTATAAGGCACTTGGCTTTGAGCAATTTGG CCAGCTGACCTACCCGGAAATTGACGCAGCAGAGGTTTTTTTCGTCAAACACTTAGTTTCAGTTGGAGAAAGGACAATAA ATGCCAACAAATAA
Upstream 100 bases:
>100_bases AACCATAAGTAAATAAGCCTTGTGATGATTTTTGTCTTGTTGTGGTCAGATTGGCAAAATTACTGTCGGGAATGGCATTT GGGGGATTTTGGAGGAAGGA
Downstream 100 bases:
>100_bases AGGTATCACAGTCGCTCGCGAAGAAGATCCAGATCTAAAGCAAGCGATTGTGCGGGCTGTTTTGGCCGATTTGCCCGAAT GGTTTGGCTTGCCGGATGCA
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Histone Acetyltransferase HPA2-Like Protein; Acetyltransferase Gnat Family; Blasticidin-S Acetyltransferase
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MQSKAGTADQGWALEEKLDEFNRHQHPFNGSGADESFAYVIKKGDQVVGGVAASSDDNAIGYIELLWVDETMRRQGLGRA LLATVEQALQAAGCKRVRLETFDYQAPAFYLENGYHEFGKLNYDYAGVIEYFFVKMLSLPIGYNIPPAFSIEAAEDLAME AIENKLHAYNVKMKPLLQQKMGVTFTFLAEENGQCIGGIFGYSTMYKIGYIESLWVAETNRHAGVGTALVDVLVNALKDF GCPIVHLDTMSYQGAAFYKALGFEQFGQLTYPEIDAAEVFFVKHLVSVGERTINANK
Sequences:
>Translated_297_residues MQSKAGTADQGWALEEKLDEFNRHQHPFNGSGADESFAYVIKKGDQVVGGVAASSDDNAIGYIELLWVDETMRRQGLGRA LLATVEQALQAAGCKRVRLETFDYQAPAFYLENGYHEFGKLNYDYAGVIEYFFVKMLSLPIGYNIPPAFSIEAAEDLAME AIENKLHAYNVKMKPLLQQKMGVTFTFLAEENGQCIGGIFGYSTMYKIGYIESLWVAETNRHAGVGTALVDVLVNALKDF GCPIVHLDTMSYQGAAFYKALGFEQFGQLTYPEIDAAEVFFVKHLVSVGERTINANK >Mature_297_residues MQSKAGTADQGWALEEKLDEFNRHQHPFNGSGADESFAYVIKKGDQVVGGVAASSDDNAIGYIELLWVDETMRRQGLGRA LLATVEQALQAAGCKRVRLETFDYQAPAFYLENGYHEFGKLNYDYAGVIEYFFVKMLSLPIGYNIPPAFSIEAAEDLAME AIENKLHAYNVKMKPLLQQKMGVTFTFLAEENGQCIGGIFGYSTMYKIGYIESLWVAETNRHAGVGTALVDVLVNALKDF GCPIVHLDTMSYQGAAFYKALGFEQFGQLTYPEIDAAEVFFVKHLVSVGERTINANK
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32927; Mature: 32927
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSKAGTADQGWALEEKLDEFNRHQHPFNGSGADESFAYVIKKGDQVVGGVAASSDDNAI CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEEECCCEEEEEEEECCCCCCE GYIELLWVDETMRRQGLGRALLATVEQALQAAGCKRVRLETFDYQAPAFYLENGYHEFGK EEEEEEEECHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHHCC LNYDYAGVIEYFFVKMLSLPIGYNIPPAFSIEAAEDLAMEAIENKLHAYNVKMKPLLQQK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MGVTFTFLAEENGQCIGGIFGYSTMYKIGYIESLWVAETNRHAGVGTALVDVLVNALKDF HCCEEEEEECCCCCEEEHHHHHHHHHHHHCHHEEEEEECCCCCCHHHHHHHHHHHHHHHH GCPIVHLDTMSYQGAAFYKALGFEQFGQLTYPEIDAAEVFFVKHLVSVGERTINANK CCCEEEEECCCCCCHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQSKAGTADQGWALEEKLDEFNRHQHPFNGSGADESFAYVIKKGDQVVGGVAASSDDNAI CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEEECCCEEEEEEEECCCCCCE GYIELLWVDETMRRQGLGRALLATVEQALQAAGCKRVRLETFDYQAPAFYLENGYHEFGK EEEEEEEECHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHHCC LNYDYAGVIEYFFVKMLSLPIGYNIPPAFSIEAAEDLAMEAIENKLHAYNVKMKPLLQQK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MGVTFTFLAEENGQCIGGIFGYSTMYKIGYIESLWVAETNRHAGVGTALVDVLVNALKDF HCCEEEEEECCCCCEEEHHHHHHHHHHHHCHHEEEEEECCCCCCHHHHHHHHHHHHHHHH GCPIVHLDTMSYQGAAFYKALGFEQFGQLTYPEIDAAEVFFVKHLVSVGERTINANK CCCEEEEECCCCCCHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA