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The map label for this gene is metQ [H]

Identifier: 116494672

GI number: 116494672

Start: 1159627

End: 1160454

Strand: Direct

Name: metQ [H]

Synonym: LSEI_1177

Alternate gene names: 116494672

Gene position: 1159627-1160454 (Clockwise)

Preceding gene: 116494670

Following gene: 116494673

Centisome position: 40.05

GC content: 43.48

Gene sequence:

>828_bases
ATGAAATTTTGGAAAAAGGCAATTTTGACGTTTGCACTGATTTTACCAGTATTTGTTTTAGCAGCTTGTGGCAAGTCGGC
TAGTTCAACGAAGAATACCACGGTTAAAGTTGGCATCATGAGCACGGATAAAGAAATTTGGACTGATATTCAATCACGTT
TGAAGAAGCAGGGTGTGACAATCAAACTTGTTCAGTTCACTGACTATAATCAGCCTAACCAAGCACTGGAAGATGGCGAT
ATTCAACTCAACGCCTTCCAGCATCACAATTTCTTGGATAACTGGAACAAGAAACACAACACCAAGATTGTTGATATCGG
CGCAACTTACATCGGCCCGATGCGCGCTTACTCCAACAAGATCAAATCGTTGAAGGACGTTAAGAACGGCGATCAGATCT
CGGTACCAAACGATCCTTCCAATGAAGGCCGTGCTTTACAGTTGTTGGCACAAAATGGCTTGCTGACGTTGAAAAAGGGT
GTAGCTTCACCGACTATTCGCGATATCACTGAAAATAAGCTGAATCTGAAGTTTACTGAATTGGATGCCGCTCAAACAGC
CCGTTCTTTGAATGATGTCGCAGTTGCTGTTGTCAACAATGATATTGCTGCTGCCGCTAATCTGAAGCCAGCTAACGCAA
TCGCAGTTGAAAAGATTACTAAGGCGTCCAAGCCTTGGGTGAACTTCATTGCTGCCAAGTCAGCCAAGGACAAGGACAAT
GCGACCTATAAGAAGATCGTGAAAGCCTATCAGACACAGCGGACAGCTGATCTTTTGAAGAAAGTTTACAAAGGTTCAAC
CTTGCCGGCTTGGAACTATAAGTTTTAG

Upstream 100 bases:

>100_bases
TAGGCTCGCTTCTAAAACTTGTTTTTAGAGGCGAGCCTTTTTGAATGCTTTCATCGCTTGCACACATCATTTGTTTACCT
GAACGAGGAGGAGAAAGTTC

Downstream 100 bases:

>100_bases
TTAGAAACGGGGACAATCATGTCAGATCAAGCAGTTGTGACTTTAAAAGATGTGGACGTTGAGTTCCACGGCAAAACTCG
CTCGGTGCATGCCGTTGATC

Product: ABC-type metal ion transport system, periplasmic component/surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKFWKKAILTFALILPVFVLAACGKSASSTKNTTVKVGIMSTDKEIWTDIQSRLKKQGVTIKLVQFTDYNQPNQALEDGD
IQLNAFQHHNFLDNWNKKHNTKIVDIGATYIGPMRAYSNKIKSLKDVKNGDQISVPNDPSNEGRALQLLAQNGLLTLKKG
VASPTIRDITENKLNLKFTELDAAQTARSLNDVAVAVVNNDIAAAANLKPANAIAVEKITKASKPWVNFIAAKSAKDKDN
ATYKKIVKAYQTQRTADLLKKVYKGSTLPAWNYKF

Sequences:

>Translated_275_residues
MKFWKKAILTFALILPVFVLAACGKSASSTKNTTVKVGIMSTDKEIWTDIQSRLKKQGVTIKLVQFTDYNQPNQALEDGD
IQLNAFQHHNFLDNWNKKHNTKIVDIGATYIGPMRAYSNKIKSLKDVKNGDQISVPNDPSNEGRALQLLAQNGLLTLKKG
VASPTIRDITENKLNLKFTELDAAQTARSLNDVAVAVVNNDIAAAANLKPANAIAVEKITKASKPWVNFIAAKSAKDKDN
ATYKKIVKAYQTQRTADLLKKVYKGSTLPAWNYKF
>Mature_275_residues
MKFWKKAILTFALILPVFVLAACGKSASSTKNTTVKVGIMSTDKEIWTDIQSRLKKQGVTIKLVQFTDYNQPNQALEDGD
IQLNAFQHHNFLDNWNKKHNTKIVDIGATYIGPMRAYSNKIKSLKDVKNGDQISVPNDPSNEGRALQLLAQNGLLTLKKG
VASPTIRDITENKLNLKFTELDAAQTARSLNDVAVAVVNNDIAAAANLKPANAIAVEKITKASKPWVNFIAAKSAKDKDN
ATYKKIVKAYQTQRTADLLKKVYKGSTLPAWNYKF

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=277, Percent_Identity=37.9061371841155, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1790093, Length=254, Percent_Identity=33.4645669291339, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 30436; Mature: 30436

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFWKKAILTFALILPVFVLAACGKSASSTKNTTVKVGIMSTDKEIWTDIQSRLKKQGVT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCE
IKLVQFTDYNQPNQALEDGDIQLNAFQHHNFLDNWNKKHNTKIVDIGATYIGPMRAYSNK
EEEEEEECCCCCCHHHCCCCEEEEEEHHCCHHHCCCCCCCCEEEEECCHHHHHHHHHHHH
IKSLKDVKNGDQISVPNDPSNEGRALQLLAQNGLLTLKKGVASPTIRDITENKLNLKFTE
HHHHHHHCCCCEEECCCCCCCCCCEEEEEHHCCCEEEHHCCCCCHHHHHCCCCCEEEEEC
LDAAQTARSLNDVAVAVVNNDIAAAANLKPANAIAVEKITKASKPWVNFIAAKSAKDKDN
CCHHHHHHHHHHEEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
ATYKKIVKAYQTQRTADLLKKVYKGSTLPAWNYKF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKFWKKAILTFALILPVFVLAACGKSASSTKNTTVKVGIMSTDKEIWTDIQSRLKKQGVT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCE
IKLVQFTDYNQPNQALEDGDIQLNAFQHHNFLDNWNKKHNTKIVDIGATYIGPMRAYSNK
EEEEEEECCCCCCHHHCCCCEEEEEEHHCCHHHCCCCCCCCEEEEECCHHHHHHHHHHHH
IKSLKDVKNGDQISVPNDPSNEGRALQLLAQNGLLTLKKGVASPTIRDITENKLNLKFTE
HHHHHHHCCCCEEECCCCCCCCCCEEEEEHHCCCEEEHHCCCCCHHHHHCCCCCEEEEEC
LDAAQTARSLNDVAVAVVNNDIAAAANLKPANAIAVEKITKASKPWVNFIAAKSAKDKDN
CCHHHHHHHHHHEEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
ATYKKIVKAYQTQRTADLLKKVYKGSTLPAWNYKF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]