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The map label for this gene is yidD [C]

Identifier: 116494667

GI number: 116494667

Start: 1153734

End: 1154039

Strand: Direct

Name: yidD [C]

Synonym: LSEI_1171

Alternate gene names: 116494667

Gene position: 1153734-1154039 (Clockwise)

Preceding gene: 116494666

Following gene: 116494668

Centisome position: 39.85

GC content: 49.02

Gene sequence:

>306_bases
ATGAAACAGGTTCTGACATGGTTAGTGCGGGGCTACCAGCGCTTCATTTCCCCGTTGCTGCCGCCGAGCTGCCGATATTA
TCCGACATGTTCAACCTACATGATTCAGGCGTTGCAGAAACATGGCGCCATCAAAGGTTCCTTAATGGGAATTGCCCGGA
TTTTACGGTGCAACCCCTTTGTTAAAGGCGGGCTTGATCCAGTGCCAGCTTTTTTCACTTTGCGGCGTAATCCGCATCCC
GAAAATGACTTGGATCTTAGTGACATTCAAAATCTCAATCATAAGCTAGGAGGCCGTCATGGCTAA

Upstream 100 bases:

>100_bases
CTTATTGATTGGCTTTGCTCTTGGGGAAGGTAATCCGCTTAAGTTGTTCCTACCATCAACATGGGTGCACTTCTTTAAGT
TTCTGCGTTAGGAGTGTTTC

Downstream 100 bases:

>100_bases
GGAAAGAAATATCAAGGTCACACAGGCAGATGAAACTCGAAATGGTCATACAGTTTCGGTTTTAAAAATCGGTGACCGGG
AGATTGGCTTTATTGAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKQVLTWLVRGYQRFISPLLPPSCRYYPTCSTYMIQALQKHGAIKGSLMGIARILRCNPFVKGGLDPVPAFFTLRRNPHP
ENDLDLSDIQNLNHKLGGRHG

Sequences:

>Translated_101_residues
MKQVLTWLVRGYQRFISPLLPPSCRYYPTCSTYMIQALQKHGAIKGSLMGIARILRCNPFVKGGLDPVPAFFTLRRNPHP
ENDLDLSDIQNLNHKLGGRHG
>Mature_101_residues
MKQVLTWLVRGYQRFISPLLPPSCRYYPTCSTYMIQALQKHGAIKGSLMGIARILRCNPFVKGGLDPVPAFFTLRRNPHP
ENDLDLSDIQNLNHKLGGRHG

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=68, Percent_Identity=55.8823529411765, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1171_LACC3 (Q03A13)

Other databases:

- EMBL:   CP000423
- RefSeq:   YP_806401.1
- STRING:   Q03A13
- GeneID:   4420207
- GenomeReviews:   CP000423_GR
- KEGG:   lca:LSEI_1171
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   CSEYAIE
- ProtClustDB:   CLSK2532250
- BioCyc:   LCAS321967:LSEI_1171-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 11447; Mature: 11447

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVLTWLVRGYQRFISPLLPPSCRYYPTCSTYMIQALQKHGAIKGSLMGIARILRCNPF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
VKGGLDPVPAFFTLRRNPHPENDLDLSDIQNLNHKLGGRHG
CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQVLTWLVRGYQRFISPLLPPSCRYYPTCSTYMIQALQKHGAIKGSLMGIARILRCNPF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
VKGGLDPVPAFFTLRRNPHPENDLDLSDIQNLNHKLGGRHG
CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA