Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494666

Identifier: 116494666

GI number: 116494666

Start: 1153554

End: 1153724

Strand: Direct

Name: 116494666

Synonym: LSEI_1170

Alternate gene names: NA

Gene position: 1153554-1153724 (Clockwise)

Preceding gene: 116494665

Following gene: 116494667

Centisome position: 39.84

GC content: 40.94

Gene sequence:

>171_bases
ATGGACTCACAATATCCTAAACGCATCTTCCACATCATTAAAATTTGGCTGATGATAGCCTTAATCGCACTGATATTGGG
CTTATTGATTGGCTTTGCTCTTGGGGAAGGTAATCCGCTTAAGTTGTTCCTACCATCAACATGGGTGCACTTCTTTAAGT
TTCTGCGTTAG

Upstream 100 bases:

>100_bases
GCCAGTGTTGTTGGCGGACGATCCTTTAGATGCAGTTGCACTTGGGACCGGTGTTTTACTCGATAATATTGAACACCATC
GCCAGTACTAGGAGCGAGCT

Downstream 100 bases:

>100_bases
GAGTGTTTCATGAAACAGGTTCTGACATGGTTAGTGCGGGGCTACCAGCGCTTCATTTCCCCGTTGCTGCCGCCGAGCTG
CCGATATTATCCGACATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MDSQYPKRIFHIIKIWLMIALIALILGLLIGFALGEGNPLKLFLPSTWVHFFKFLR

Sequences:

>Translated_56_residues
MDSQYPKRIFHIIKIWLMIALIALILGLLIGFALGEGNPLKLFLPSTWVHFFKFLR
>Mature_56_residues
MDSQYPKRIFHIIKIWLMIALIALILGLLIGFALGEGNPLKLFLPSTWVHFFKFLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6542; Mature: 6542

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQYPKRIFHIIKIWLMIALIALILGLLIGFALGEGNPLKLFLPSTWVHFFKFLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHC
>Mature Secondary Structure
MDSQYPKRIFHIIKIWLMIALIALILGLLIGFALGEGNPLKLFLPSTWVHFFKFLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA