Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is yfeW [H]

Identifier: 116494649

GI number: 116494649

Start: 1136233

End: 1137240

Strand: Direct

Name: yfeW [H]

Synonym: LSEI_1152

Alternate gene names: 116494649

Gene position: 1136233-1137240 (Clockwise)

Preceding gene: 116494648

Following gene: 116494651

Centisome position: 39.24

GC content: 51.09

Gene sequence:

>1008_bases
ATGGATTTTCAAGCAGTGACGGATGAACTGAAGACATGGACAAAAGCCCGGGTAATGCCGGGTTTTAGTGTGGCATTATT
GACGGGTAAAACGGTGCAGACGGCGGTTAGTGGCGAGGCACAGTGGTTCCCGCAACCTGCGCCTTTGCAGCCGCATATGC
TGTACGACGTGGCATCTTTGACGAAGGTGATAGGAACTACCACGGTGTTCTTGCAAGCATGGGACCAAGGCTTGGTTTCG
CCGGATATGCCGCTACACCGATTCTTGCCAGATTTCCCACACACAACCACTTTTCGACAGGCACTCACGCATACTTCAGG
ACTGGAAGGCTATATTCCGCACCGTAATGCCTTGCCAGCCCCGGCGCTGAAACAGGCGTTGATGACGCAACTGACTGTTA
CCGAAGAAGTGGATCGTCAAGTGGTTTATCGCGACGTGAATTTGTTGCTGGTTGGCTGGGCTTTGGAACAGGTATATCAT
CAGCCAATTCAAACACTCATCACGCGGCAAGTGATACAGCCGCTAGCCTTACCGCAAGCTACTTTTCAACCTGATTCACA
ACAATGCGTTCCAACAACGTATAGTCCGGCAGTCGGGTTGCGGCAAGGCGTTGTCCATGATCCCAAGAGCGCCATTCTTG
GTAAGCATAGCGGTGCAGCTGGCTTATTTGCTTCGTTGGCCGACCTAGTAACTTTCACCGAATACTTTTTTGGCAACCGC
CAATCAGCAAGCTGGCCCGCGCATGCGGTTGATCTCACACAGGATTGGACAAAGCATCACTTAGGCCGAAGTCTCGGATG
GGACTTGCGGCGCGATGGTCAAGGCCGACTATGGCTTTATCATACTGGCTATACGGGCACTTTTTGGCTGATTCAACCTG
ATGATCAATTGGCATTGGTTGTCTTGACCAATCGGGTTCACCCCCAACCAAATCCGGCTTTTTTGGCAAGGCGGGATGCT
TTGATAGCCCGATTTTTAAGTGATTTCAAAACAATGCCTGCTGTATAA

Upstream 100 bases:

>100_bases
ACAATCAATTTTTGATGATTGCTGGTCCTAATCGCCTAACGCTGTGGTTTCGGGTGGCGTGATTCGTGATAATGGTCAGT
ACATCAGAGAGAAGGCCAGC

Downstream 100 bases:

>100_bases
CTGATAAAGTTTTGGGACATGATTTATAGTTGCAAAAAAAGACGAGCGATTGTCCGTAGTATTTGGAGTACGGAAAACCG
TTCGTCTTTCATTTTGTTAT

Product: Beta-lactamase class C related penicillin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MDFQAVTDELKTWTKARVMPGFSVALLTGKTVQTAVSGEAQWFPQPAPLQPHMLYDVASLTKVIGTTTVFLQAWDQGLVS
PDMPLHRFLPDFPHTTTFRQALTHTSGLEGYIPHRNALPAPALKQALMTQLTVTEEVDRQVVYRDVNLLLVGWALEQVYH
QPIQTLITRQVIQPLALPQATFQPDSQQCVPTTYSPAVGLRQGVVHDPKSAILGKHSGAAGLFASLADLVTFTEYFFGNR
QSASWPAHAVDLTQDWTKHHLGRSLGWDLRRDGQGRLWLYHTGYTGTFWLIQPDDQLALVVLTNRVHPQPNPAFLARRDA
LIARFLSDFKTMPAV

Sequences:

>Translated_335_residues
MDFQAVTDELKTWTKARVMPGFSVALLTGKTVQTAVSGEAQWFPQPAPLQPHMLYDVASLTKVIGTTTVFLQAWDQGLVS
PDMPLHRFLPDFPHTTTFRQALTHTSGLEGYIPHRNALPAPALKQALMTQLTVTEEVDRQVVYRDVNLLLVGWALEQVYH
QPIQTLITRQVIQPLALPQATFQPDSQQCVPTTYSPAVGLRQGVVHDPKSAILGKHSGAAGLFASLADLVTFTEYFFGNR
QSASWPAHAVDLTQDWTKHHLGRSLGWDLRRDGQGRLWLYHTGYTGTFWLIQPDDQLALVVLTNRVHPQPNPAFLARRDA
LIARFLSDFKTMPAV
>Mature_335_residues
MDFQAVTDELKTWTKARVMPGFSVALLTGKTVQTAVSGEAQWFPQPAPLQPHMLYDVASLTKVIGTTTVFLQAWDQGLVS
PDMPLHRFLPDFPHTTTFRQALTHTSGLEGYIPHRNALPAPALKQALMTQLTVTEEVDRQVVYRDVNLLLVGWALEQVYH
QPIQTLITRQVIQPLALPQATFQPDSQQCVPTTYSPAVGLRQGVVHDPKSAILGKHSGAAGLFASLADLVTFTEYFFGNR
QSASWPAHAVDLTQDWTKHHLGRSLGWDLRRDGQGRLWLYHTGYTGTFWLIQPDDQLALVVLTNRVHPQPNPAFLARRDA
LIARFLSDFKTMPAV

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=384, Percent_Identity=25, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 37405; Mature: 37405

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFQAVTDELKTWTKARVMPGFSVALLTGKTVQTAVSGEAQWFPQPAPLQPHMLYDVASL
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
TKVIGTTTVFLQAWDQGLVSPDMPLHRFLPDFPHTTTFRQALTHTSGLEGYIPHRNALPA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PALKQALMTQLTVTEEVDRQVVYRDVNLLLVGWALEQVYHQPIQTLITRQVIQPLALPQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TFQPDSQQCVPTTYSPAVGLRQGVVHDPKSAILGKHSGAAGLFASLADLVTFTEYFFGNR
CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
QSASWPAHAVDLTQDWTKHHLGRSLGWDLRRDGQGRLWLYHTGYTGTFWLIQPDDQLALV
CCCCCCCCEEHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEE
VLTNRVHPQPNPAFLARRDALIARFLSDFKTMPAV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFQAVTDELKTWTKARVMPGFSVALLTGKTVQTAVSGEAQWFPQPAPLQPHMLYDVASL
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
TKVIGTTTVFLQAWDQGLVSPDMPLHRFLPDFPHTTTFRQALTHTSGLEGYIPHRNALPA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PALKQALMTQLTVTEEVDRQVVYRDVNLLLVGWALEQVYHQPIQTLITRQVIQPLALPQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TFQPDSQQCVPTTYSPAVGLRQGVVHDPKSAILGKHSGAAGLFASLADLVTFTEYFFGNR
CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
QSASWPAHAVDLTQDWTKHHLGRSLGWDLRRDGQGRLWLYHTGYTGTFWLIQPDDQLALV
CCCCCCCCEEHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEE
VLTNRVHPQPNPAFLARRDALIARFLSDFKTMPAV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]