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The map label for this gene is 116494570

Identifier: 116494570

GI number: 116494570

Start: 1054455

End: 1055699

Strand: Direct

Name: 116494570

Synonym: LSEI_1068

Alternate gene names: NA

Gene position: 1054455-1055699 (Clockwise)

Preceding gene: 116494568

Following gene: 116494574

Centisome position: 36.42

GC content: 49.96

Gene sequence:

>1245_bases
ATGTCCCAATACGATCCTACACTGTCCGTCCTTGGAATACCAGACCATAATATCAAAGTTGCCTTTGTTCGTCATGAATA
TCGCGGCAACGGGGTACGTCGCCGCCAGTATCATGTGATTGATGCCGAGCTGACTTACCGGTTAACCCGGTGCCCACTGT
GTGGCTTTGAGGCCTTGCACCCTAACGGGTTTTATACGGCCCACGTGCGCGTCCTCAATGGGGTTGAAATGCCGACAGTC
ATTGACTTGCACAAGCAACGATGGCGCTGTCATAACTGTTACCACACAGTCAGTGCCAAGACGCCACTCGTGCAACCCAA
CCACACGATCGCCACTCACATGACAGAGCGAATCATGAAGTTAGCGCATGAACGGTTGCCAGTCAAAACCATCGCCCGTA
TTATCGGAATCTCAGCTTCCTCGGTTCAACGGATCATTGACCAAAATCTCAAACTCCGACCGGCTCGCCGGCTGCCCACG
CGACTCTGCTTTGATGAGTTCCGTTCTACTCATGGCATGATGTCGTTTATCTGTCTTGATGCCGATTCACATCGTCTGAT
TGCCTTGCTTGGTGATCGATTCAACCGCACGATTAAAAACTTCTTCATCGCTCATTATTCACTCGCTGAACGCACTCGGG
TCCAGACGGTCACCATGGACATGAATGCAGCTTATCAGACGATTATTCATGAGGTTTTCCCCAAGGCCCAAGTCGTCATT
GATCGGTTCCATATCATTCAACTTGCGGCTCGTGCCCTTGATCAGGTACGCGTCCAAGCGCTCAAACAGCTTGATGACAA
ACACAGCCGTCCTTATAAGATCATGAAGACAAACTGGCGGCTTTTTCATCAAACTGCGCCTGACGCTAAACACAAACAGT
TCCTGTTTGGTTTGAATGAATACGTCACGCAACAGGAGGCCATCGATATCGCACTTGATACTGAGCCCAAGCTCAAGCAA
ACCTACGAGACCTACTTAGCGCTTCATGATGCCTTGATGGTGAAGAAACATCCCACGGAACTGGCAAACCTGTTAGCTAC
TTACGAGCCAAACGGTACGGCAATGGACATGACGATCGCGACGCTTAAGCGACACAAAGTCGCTGTTCTCGCCGCTGTCA
CCAGCCCTTATTCCAACGGTCCGATCGAAGGGGTTAACCGCCTCATCAAGTCACTCAAACGATCCTGTTTTGGCTTCAAG
AATCAGCTGAACTTCTTCAAACGAATCTACCAAATCACGGCATAA

Upstream 100 bases:

>100_bases
AACGTGTAGGCCCTTTTTGGATAACGCAAAAAGACACCTACTCAGTGTCCATGCTATGCTTGTTAGCGTCGAAACCAAAA
GCAAGCGAGGTTATGAGTAA

Downstream 100 bases:

>100_bases
CATGACAAAGACGGCTCCCCAAATGGAGAACCGCCTCAAATGATAAATTTATTCTTCAACACCAGTTGACGTAGAGCCAA
AAAAGACTGATTTGCCATAT

Product: transposase

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Transposase; Transposase For IS; Transposase IS; Truncated; Truncated Transposase; Degenerate Transposase; Transposase-Like; Transposase Subfamily; Transposase ISLasa4v; ISL3 Family Transposase; Transposase TnpA ISL3 Family

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALHPNGFYTAHVRVLNGVEMPTV
IDLHKQRWRCHNCYHTVSAKTPLVQPNHTIATHMTERIMKLAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPT
RLCFDEFRSTHGMMSFICLDADSHRLIALLGDRFNRTIKNFFIAHYSLAERTRVQTVTMDMNAAYQTIIHEVFPKAQVVI
DRFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNEYVTQQEAIDIALDTEPKLKQ
TYETYLALHDALMVKKHPTELANLLATYEPNGTAMDMTIATLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFK
NQLNFFKRIYQITA

Sequences:

>Translated_414_residues
MSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALHPNGFYTAHVRVLNGVEMPTV
IDLHKQRWRCHNCYHTVSAKTPLVQPNHTIATHMTERIMKLAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPT
RLCFDEFRSTHGMMSFICLDADSHRLIALLGDRFNRTIKNFFIAHYSLAERTRVQTVTMDMNAAYQTIIHEVFPKAQVVI
DRFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNEYVTQQEAIDIALDTEPKLKQ
TYETYLALHDALMVKKHPTELANLLATYEPNGTAMDMTIATLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFK
NQLNFFKRIYQITA
>Mature_413_residues
SQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALHPNGFYTAHVRVLNGVEMPTVI
DLHKQRWRCHNCYHTVSAKTPLVQPNHTIATHMTERIMKLAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTR
LCFDEFRSTHGMMSFICLDADSHRLIALLGDRFNRTIKNFFIAHYSLAERTRVQTVTMDMNAAYQTIIHEVFPKAQVVID
RFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNEYVTQQEAIDIALDTEPKLKQT
YETYLALHDALMVKKHPTELANLLATYEPNGTAMDMTIATLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFKN
QLNFFKRIYQITA

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47761; Mature: 47630

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALH
CCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCC
PNGFYTAHVRVLNGVEMPTVIDLHKQRWRCHNCYHTVSAKTPLVQPNHTIATHMTERIMK
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHH
LAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTRLCFDEFRSTHGMMSFICLD
HHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCEEEEEEC
ADSHRLIALLGDRFNRTIKNFFIAHYSLAERTRVQTVTMDMNAAYQTIIHEVFPKAQVVI
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHHHHHHHHCCHHHHHH
DRFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCHHHHHHHHHHH
YVTQQEAIDIALDTEPKLKQTYETYLALHDALMVKKHPTELANLLATYEPNGTAMDMTIA
HHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCEEEHHHH
TLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFKNQLNFFKRIYQITA
HHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALH
CCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCC
PNGFYTAHVRVLNGVEMPTVIDLHKQRWRCHNCYHTVSAKTPLVQPNHTIATHMTERIMK
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHH
LAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTRLCFDEFRSTHGMMSFICLD
HHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCEEEEEEC
ADSHRLIALLGDRFNRTIKNFFIAHYSLAERTRVQTVTMDMNAAYQTIIHEVFPKAQVVI
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHHHHHHHHCCHHHHHH
DRFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCHHHHHHHHHHH
YVTQQEAIDIALDTEPKLKQTYETYLALHDALMVKKHPTELANLLATYEPNGTAMDMTIA
HHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCEEEHHHH
TLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFKNQLNFFKRIYQITA
HHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA