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The map label for this gene is cggR [H]

Identifier: 116494472

GI number: 116494472

Start: 947810

End: 948847

Strand: Direct

Name: cggR [H]

Synonym: LSEI_0966

Alternate gene names: 116494472

Gene position: 947810-948847 (Clockwise)

Preceding gene: 116494470

Following gene: 116494473

Centisome position: 32.74

GC content: 49.13

Gene sequence:

>1038_bases
ATGCATACTGAACTTGCGTGGCTCAAAGCGATCGCGCCTGATCTGATGGGCGTTGTCACTAAACGCTATCAGGTCCTTCA
ATTTATTAACTGGATGGCACCAGTTGGCCGGCGAACGTTGGCCGAACAGATGAAGATCTCAGAACGTGCTTTGCGCACAG
AAACGGATTTTCTGCGTAGTCAAGGTTTGTTGGAAAGCTCAAAATCTGGCATGGTGCTAACAGCAAAAGGGTTAGAGACA
TTTCATGGCCTTGATCATCTTATGAATCAGCTGTTAGGAATTAAGGATGATGAAAAACGACTTGCTGCCCAGCTTCAAAT
CGATCATTGTTTGGTCGTATCTGGCGATGCCGATCAAAGTGGTCGGGTGCTTGATGAGCTGGGGAAGACGTTGAATTCGA
CCTTACAATTACTGTTGCCGCCGGGTCGCTTGACGGTTGCCGTGATGGGTGGAACGACAATGGCACATCTTGCAAGGCAG
CTGACATTTCAGTTGTCTGCAGGACGTGAATTGACGTTTGTCCCTGCTCGCGGTGGCTTAGGCGAAGCGGTGACGATTCA
GGCCAACTCGATTGCTGCTGCGATGGCGGAAGCAACCGACAGCAACTACCGAGCGTTGTATGTACCGGAAAATCTTAGCT
CGGAATCCTACGAATCATTGATTAAAGAGCCTTCTGTTAAAGAGGTTTTAGGGCTGATTGATAAGGCTCAGGTCGTGATT
CATAGTGTGGGTGACGCTTTAGTCATGGCTCGTCGCCGTGGCATGTCATCTGACACGATCAGCATGTTGAAAGCCAAACA
TGCCGTTGCCGAAGCATTCGGTGTTTTCTACGATGCGAGCGGCAAGGTCGTTTACAAGATACCGCAGATTGGTTTACAGC
TCGCGGATCTTGATCATATACCGTATGTATTCGCTGTTGCTGCTGGCAAAAGTAAGTCCAAAGCAATTGCGGCATATATG
CAACACGCACCGAGTCGGACGTGGCTGTTAACAGACGTCGGTGCAACTAATTCGATTTTAACTGGGGCAACCCGTTAG

Upstream 100 bases:

>100_bases
GGAAAACAGCATTTGTTGGGTTCCTAATTTTTTTCAGCTTGCTGGGTCGGCGAACGACTCGGAGGGACGTGAAATGACCC
ATTAAAGAAGGACGTGCCTT

Downstream 100 bases:

>100_bases
AATAAAACCTTATTTCCTAAAGGAGGAAATTTTAGCATGACTGTTAAGATTGGTATTAATGGTTTTGGCCGTATCGGTCG
TTTGGCATTCCGTCGTATTT

Product: central glycolytic genes regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MHTELAWLKAIAPDLMGVVTKRYQVLQFINWMAPVGRRTLAEQMKISERALRTETDFLRSQGLLESSKSGMVLTAKGLET
FHGLDHLMNQLLGIKDDEKRLAAQLQIDHCLVVSGDADQSGRVLDELGKTLNSTLQLLLPPGRLTVAVMGGTTMAHLARQ
LTFQLSAGRELTFVPARGGLGEAVTIQANSIAAAMAEATDSNYRALYVPENLSSESYESLIKEPSVKEVLGLIDKAQVVI
HSVGDALVMARRRGMSSDTISMLKAKHAVAEAFGVFYDASGKVVYKIPQIGLQLADLDHIPYVFAVAAGKSKSKAIAAYM
QHAPSRTWLLTDVGATNSILTGATR

Sequences:

>Translated_345_residues
MHTELAWLKAIAPDLMGVVTKRYQVLQFINWMAPVGRRTLAEQMKISERALRTETDFLRSQGLLESSKSGMVLTAKGLET
FHGLDHLMNQLLGIKDDEKRLAAQLQIDHCLVVSGDADQSGRVLDELGKTLNSTLQLLLPPGRLTVAVMGGTTMAHLARQ
LTFQLSAGRELTFVPARGGLGEAVTIQANSIAAAMAEATDSNYRALYVPENLSSESYESLIKEPSVKEVLGLIDKAQVVI
HSVGDALVMARRRGMSSDTISMLKAKHAVAEAFGVFYDASGKVVYKIPQIGLQLADLDHIPYVFAVAAGKSKSKAIAAYM
QHAPSRTWLLTDVGATNSILTGATR
>Mature_345_residues
MHTELAWLKAIAPDLMGVVTKRYQVLQFINWMAPVGRRTLAEQMKISERALRTETDFLRSQGLLESSKSGMVLTAKGLET
FHGLDHLMNQLLGIKDDEKRLAAQLQIDHCLVVSGDADQSGRVLDELGKTLNSTLQLLLPPGRLTVAVMGGTTMAHLARQ
LTFQLSAGRELTFVPARGGLGEAVTIQANSIAAAMAEATDSNYRALYVPENLSSESYESLIKEPSVKEVLGLIDKAQVVI
HSVGDALVMARRRGMSSDTISMLKAKHAVAEAFGVFYDASGKVVYKIPQIGLQLADLDHIPYVFAVAAGKSKSKAIAAYM
QHAPSRTWLLTDVGATNSILTGATR

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=240, Percent_Identity=31.6666666666667, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 37359; Mature: 37359

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTELAWLKAIAPDLMGVVTKRYQVLQFINWMAPVGRRTLAEQMKISERALRTETDFLRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLLESSKSGMVLTAKGLETFHGLDHLMNQLLGIKDDEKRLAAQLQIDHCLVVSGDADQS
CCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECEEEEEECCCCCC
GRVLDELGKTLNSTLQLLLPPGRLTVAVMGGTTMAHLARQLTFQLSAGRELTFVPARGGL
CHHHHHHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHEECCCCEEEEEECCCCC
GEAVTIQANSIAAAMAEATDSNYRALYVPENLSSESYESLIKEPSVKEVLGLIDKAQVVI
CCEEEEECCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
HSVGDALVMARRRGMSSDTISMLKAKHAVAEAFGVFYDASGKVVYKIPQIGLQLADLDHI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEECCCCC
PYVFAVAAGKSKSKAIAAYMQHAPSRTWLLTDVGATNSILTGATR
CEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MHTELAWLKAIAPDLMGVVTKRYQVLQFINWMAPVGRRTLAEQMKISERALRTETDFLRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLLESSKSGMVLTAKGLETFHGLDHLMNQLLGIKDDEKRLAAQLQIDHCLVVSGDADQS
CCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECEEEEEECCCCCC
GRVLDELGKTLNSTLQLLLPPGRLTVAVMGGTTMAHLARQLTFQLSAGRELTFVPARGGL
CHHHHHHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHEECCCCEEEEEECCCCC
GEAVTIQANSIAAAMAEATDSNYRALYVPENLSSESYESLIKEPSVKEVLGLIDKAQVVI
CCEEEEECCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
HSVGDALVMARRRGMSSDTISMLKAKHAVAEAFGVFYDASGKVVYKIPQIGLQLADLDHI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEECCCCC
PYVFAVAAGKSKSKAIAAYMQHAPSRTWLLTDVGATNSILTGATR
CEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1452037 [H]