Click here to switch to the map view.

The map label for this gene is cinA

Identifier: 116494429

GI number: 116494429

Start: 898619

End: 899860

Strand: Direct

Name: cinA

Synonym: LSEI_0922

Alternate gene names: 116494429

Gene position: 898619-899860 (Clockwise)

Preceding gene: 116494428

Following gene: 116494430

Centisome position: 31.04

GC content: 51.37

Gene sequence:

>1242_bases
ATGCAAGCAGAGATTATTGCTGTCGGGACAGAGATCCTGATGGGACAGATTACTAACACAAATGGTGCCTATATGGCTAA
GCAACTGACAGCACTGGGTATTGATAGCTACCATCAACAGGTGGTGGGAGACAACGGCCCGCGACTTGAGGAGGCCATTA
AGTTGGCGGAAAGTCGCAGTAATTTAGTTATTTTGATTGGCGGGTTAGGACCGACACCAGATGATCTGACCAAGCAAACA
TTGGCAGCGCACTTGAACCGCAAATTGGTTGAAGATCCTGACGCTATGGCTAAATTACAGGCGCGCGTCAAGCAACAGCA
GCGGCCAATGACGCCTAATAATCAATTACAGGCCATGTATCCGGAAGGCGCCGATATTTTGGTCAATCGGGTTGGCTTAG
CGGTTGGCGCGTGGATCGTCAATGGGCAGCACACCTATGTTTTATTGCCGGGACCACCGAAGGAATTCGTTCCGATGGTT
GATCATGAACTGTTGCCCCGGCTAGCAAAATGGAGCGGCCACGCGGAAGTTATGGTCAGCCGGGTCTTACGTTTCTTTGG
CATTGGCGAATCGCAACTAGTGACAGATCTGGACGACTTGATTGCCAACCAAACCGATCCGACCATTGCAACTTATATCA
AGGATCATGAGGTGACGGTGCGCGTCACTGCCAGTGGCGCTACCGAAAAAGACGCTGATGCAAAGTTAGAACCAATGGTC
GGTGCCATCATGGATCGTGATGGTCAATATTTTTACGGCTACGGTGACGACAATAGTTTGGCAAAAGAGCTTGTGAAGAC
GCTTGCGGCAAATGATATGCAAATTACTGCAGCTGAGAGTTTGACTGCCGGCGCATTTCAAGCAGCGTTAGGCGATGTGC
CGGGGGTATCCACTTATTTTAAGGGCGGTTTTGTCACTTACTCACTTGCAACAAAGGCCGCTTTTTTGGCAATTGATGCT
CGCGAATTAGCGGCACACGGAGTTGTCAGCGCATTTACAGCCAAGGCGATGGCTGAACATGCTCGGCGTAAGGCAGCGGC
GGATATAAGTGTCAGCTTTACCGGCGTTGCCGGTCCAGACACGCTGGAAGGACAGCCTGCTGGTACGGTTTGGATCGGTT
TAGCGCGGCGCGGCCAGCTGCCTGAAGCACATGTTTACCATTTTCCTGGTGGTCGCAATGATGTCCGGCAGCGTGCTGTG
ATGACTGGTATGATGCTTGCATTAAGGGCACTGCAGGCCTAA

Upstream 100 bases:

>100_bases
GAAGTATCTAAGCACCATACAGTTATTTAGTTGCACCTTTTTTTAAAAATGTCAGGTCAAGTACCTTAAAAAACGAATTC
TATTGTTAGGTGGGAAAAGT

Downstream 100 bases:

>100_bases
CAGAATCATTCTTTAACACGTTAATACGTCAGGTTTACGCAAGAGGAGGCGGCAAGATGGCAGGAGACGAACGCCAGAAA
GCATTGGATGTTGCACTGAA

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MQAEIIAVGTEILMGQITNTNGAYMAKQLTALGIDSYHQQVVGDNGPRLEEAIKLAESRSNLVILIGGLGPTPDDLTKQT
LAAHLNRKLVEDPDAMAKLQARVKQQQRPMTPNNQLQAMYPEGADILVNRVGLAVGAWIVNGQHTYVLLPGPPKEFVPMV
DHELLPRLAKWSGHAEVMVSRVLRFFGIGESQLVTDLDDLIANQTDPTIATYIKDHEVTVRVTASGATEKDADAKLEPMV
GAIMDRDGQYFYGYGDDNSLAKELVKTLAANDMQITAAESLTAGAFQAALGDVPGVSTYFKGGFVTYSLATKAAFLAIDA
RELAAHGVVSAFTAKAMAEHARRKAAADISVSFTGVAGPDTLEGQPAGTVWIGLARRGQLPEAHVYHFPGGRNDVRQRAV
MTGMMLALRALQA

Sequences:

>Translated_413_residues
MQAEIIAVGTEILMGQITNTNGAYMAKQLTALGIDSYHQQVVGDNGPRLEEAIKLAESRSNLVILIGGLGPTPDDLTKQT
LAAHLNRKLVEDPDAMAKLQARVKQQQRPMTPNNQLQAMYPEGADILVNRVGLAVGAWIVNGQHTYVLLPGPPKEFVPMV
DHELLPRLAKWSGHAEVMVSRVLRFFGIGESQLVTDLDDLIANQTDPTIATYIKDHEVTVRVTASGATEKDADAKLEPMV
GAIMDRDGQYFYGYGDDNSLAKELVKTLAANDMQITAAESLTAGAFQAALGDVPGVSTYFKGGFVTYSLATKAAFLAIDA
RELAAHGVVSAFTAKAMAEHARRKAAADISVSFTGVAGPDTLEGQPAGTVWIGLARRGQLPEAHVYHFPGGRNDVRQRAV
MTGMMLALRALQA
>Mature_413_residues
MQAEIIAVGTEILMGQITNTNGAYMAKQLTALGIDSYHQQVVGDNGPRLEEAIKLAESRSNLVILIGGLGPTPDDLTKQT
LAAHLNRKLVEDPDAMAKLQARVKQQQRPMTPNNQLQAMYPEGADILVNRVGLAVGAWIVNGQHTYVLLPGPPKEFVPMV
DHELLPRLAKWSGHAEVMVSRVLRFFGIGESQLVTDLDDLIANQTDPTIATYIKDHEVTVRVTASGATEKDADAKLEPMV
GAIMDRDGQYFYGYGDDNSLAKELVKTLAANDMQITAAESLTAGAFQAALGDVPGVSTYFKGGFVTYSLATKAAFLAIDA
RELAAHGVVSAFTAKAMAEHARRKAAADISVSFTGVAGPDTLEGQPAGTVWIGLARRGQLPEAHVYHFPGGRNDVRQRAV
MTGMMLALRALQA

Specific function: Unknown

COG id: COG1058

COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family

Homologues:

Organism=Escherichia coli, GI1788583, Length=285, Percent_Identity=29.4736842105263, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789052, Length=141, Percent_Identity=37.5886524822695, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787818, Length=143, Percent_Identity=35.6643356643357, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CINA_LACC3 (Q03AQ1)

Other databases:

- EMBL:   CP000423
- RefSeq:   YP_806163.1
- ProteinModelPortal:   Q03AQ1
- SMR:   Q03AQ1
- STRING:   Q03AQ1
- GeneID:   4419319
- GenomeReviews:   CP000423_GR
- KEGG:   lca:LSEI_0922
- eggNOG:   COG1058
- HOGENOM:   HBG449871
- OMA:   NPTVAPY
- PhylomeDB:   Q03AQ1
- ProtClustDB:   PRK00549
- BioCyc:   LCAS321967:LSEI_0922-MONOMER
- HAMAP:   MF_00226_B
- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453
- Gene3D:   G3DSA:3.40.980.10
- PIRSF:   PIRSF006728
- SMART:   SM00852
- TIGRFAMs:   TIGR00199
- TIGRFAMs:   TIGR00200

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth

EC number: NA

Molecular weight: Translated: 44299; Mature: 44299

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAEIIAVGTEILMGQITNTNGAYMAKQLTALGIDSYHQQVVGDNGPRLEEAIKLAESRS
CCCEEEEECHHEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCC
NLVILIGGLGPTPDDLTKQTLAAHLNRKLVEDPDAMAKLQARVKQQQRPMTPNNQLQAMY
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
PEGADILVNRVGLAVGAWIVNGQHTYVLLPGPPKEFVPMVDHELLPRLAKWSGHAEVMVS
CCCHHHHHHHHHHHEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
RVLRFFGIGESQLVTDLDDLIANQTDPTIATYIKDHEVTVRVTASGATEKDADAKLEPMV
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCHHHHH
GAIMDRDGQYFYGYGDDNSLAKELVKTLAANDMQITAAESLTAGAFQAALGDVPGVSTYF
HHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHH
KGGFVTYSLATKAAFLAIDARELAAHGVVSAFTAKAMAEHARRKAAADISVSFTGVAGPD
CCCEEEEEHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
TLEGQPAGTVWIGLARRGQLPEAHVYHFPGGRNDVRQRAVMTGMMLALRALQA
CCCCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQAEIIAVGTEILMGQITNTNGAYMAKQLTALGIDSYHQQVVGDNGPRLEEAIKLAESRS
CCCEEEEECHHEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCC
NLVILIGGLGPTPDDLTKQTLAAHLNRKLVEDPDAMAKLQARVKQQQRPMTPNNQLQAMY
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
PEGADILVNRVGLAVGAWIVNGQHTYVLLPGPPKEFVPMVDHELLPRLAKWSGHAEVMVS
CCCHHHHHHHHHHHEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
RVLRFFGIGESQLVTDLDDLIANQTDPTIATYIKDHEVTVRVTASGATEKDADAKLEPMV
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCHHHHH
GAIMDRDGQYFYGYGDDNSLAKELVKTLAANDMQITAAESLTAGAFQAALGDVPGVSTYF
HHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHH
KGGFVTYSLATKAAFLAIDARELAAHGVVSAFTAKAMAEHARRKAAADISVSFTGVAGPD
CCCEEEEEHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
TLEGQPAGTVWIGLARRGQLPEAHVYHFPGGRNDVRQRAVMTGMMLALRALQA
CCCCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA