| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is ppnK
Identifier: 116494410
GI number: 116494410
Start: 878421
End: 879218
Strand: Direct
Name: ppnK
Synonym: LSEI_0902
Alternate gene names: 116494410
Gene position: 878421-879218 (Clockwise)
Preceding gene: 116494409
Following gene: 116494411
Centisome position: 30.34
GC content: 47.49
Gene sequence:
>798_bases ATGCGTGTGACAGTTTTCCATAATAGCATACCTGCCTCAATCACGGCTGCGCAAAAGCTGACGAAGCTTTTGAAGAGCGG TCACTTTGAGCTTGATGAGCGGCATCCCGAGGTGGTCGTTACCATCGGCGGTGATGGTACGCTCCTTTCGGCCTTTCATC GCTATGCGGATCAGTTAAACTCAATTCGCTTCATCGGTGTGCATACAGGCCATTTGGGTTTTTACACAGACTGGCGGGAT TTTGAAATTGAAGATTTAGTTATCGCCTTAAAAGAAGACTCTGGACAAAGCGTTAGCTACCCACTTTTGGATGTTCAGGC GACTTATGCTGACGCGACCAGTGCTCATTATCTAGCATTGAATGAGTCAACCTTGAAGCGTTTAAACGGTACTATGCGGA CGGAAGTCTATATCAAAGGCGATTTCTTTGAGAGCTTCCGCGGGGATGGTTTGTGTGTGTCGACGCCAACTGGATCTACA GCTTACAGTAAGTCTAACGGCGGTGCTGTGATTCATCCGCGATTGGATGCGTTGCAAATGACCGAAATTGCGTCCATTAA TAATCGGGTTTTTCGTACCCTCAGTTCGCCGATTATCACGGCACCAGACGAGTGGGTGACATTGGAGCCGACAGGTCGCG ATGATTACGTCATGACTGTGGATCAGTTCGTCATCAATCCACCAACAATCAAACAAATTCGGTATAAAATTGCGAAAGAA CGGATTCATTTTGCACGCTACCGGCATATGCATTTCTGGGATCGTGTTGAAGACGCCTTTATCGGAGCCAAACACTGA
Upstream 100 bases:
>100_bases GAAGAAATTCAAGAAGCCCAGCATCTGTTTGTTTATGGTAAAGGGCAGCAGCCACATTCGAAAACAAAGGATCACCATGA CGATAAAAAGGATGAGTAAG
Downstream 100 bases:
>100_bases TGCGATTTGAATGGCAGTATGAGGGACCGCCGCTGAAATTGGCGGCTTTTTTAAAACAACAGGGTTTTTCCCGTGCACAG CTTAAGAAACTTCGTTATCA
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRVTVFHNSIPASITAAQKLTKLLKSGHFELDERHPEVVVTIGGDGTLLSAFHRYADQLNSIRFIGVHTGHLGFYTDWRD FEIEDLVIALKEDSGQSVSYPLLDVQATYADATSAHYLALNESTLKRLNGTMRTEVYIKGDFFESFRGDGLCVSTPTGST AYSKSNGGAVIHPRLDALQMTEIASINNRVFRTLSSPIITAPDEWVTLEPTGRDDYVMTVDQFVINPPTIKQIRYKIAKE RIHFARYRHMHFWDRVEDAFIGAKH
Sequences:
>Translated_265_residues MRVTVFHNSIPASITAAQKLTKLLKSGHFELDERHPEVVVTIGGDGTLLSAFHRYADQLNSIRFIGVHTGHLGFYTDWRD FEIEDLVIALKEDSGQSVSYPLLDVQATYADATSAHYLALNESTLKRLNGTMRTEVYIKGDFFESFRGDGLCVSTPTGST AYSKSNGGAVIHPRLDALQMTEIASINNRVFRTLSSPIITAPDEWVTLEPTGRDDYVMTVDQFVINPPTIKQIRYKIAKE RIHFARYRHMHFWDRVEDAFIGAKH >Mature_265_residues MRVTVFHNSIPASITAAQKLTKLLKSGHFELDERHPEVVVTIGGDGTLLSAFHRYADQLNSIRFIGVHTGHLGFYTDWRD FEIEDLVIALKEDSGQSVSYPLLDVQATYADATSAHYLALNESTLKRLNGTMRTEVYIKGDFFESFRGDGLCVSTPTGST AYSKSNGGAVIHPRLDALQMTEIASINNRVFRTLSSPIITAPDEWVTLEPTGRDDYVMTVDQFVINPPTIKQIRYKIAKE RIHFARYRHMHFWDRVEDAFIGAKH
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Escherichia coli, GI1788968, Length=164, Percent_Identity=34.7560975609756, Blast_Score=82, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320794, Length=188, Percent_Identity=31.9148936170213, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325068, Length=152, Percent_Identity=29.6052631578947, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_LACC3 (Q03AS0)
Other databases:
- EMBL: CP000423 - RefSeq: YP_806144.1 - ProteinModelPortal: Q03AS0 - SMR: Q03AS0 - STRING: Q03AS0 - GeneID: 4421717 - GenomeReviews: CP000423_GR - KEGG: lca:LSEI_0902 - eggNOG: COG0061 - HOGENOM: HBG314020 - OMA: PSIRAIQ - ProtClustDB: PRK04885 - BioCyc: LCAS321967:LSEI_0902-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 29893; Mature: 29893
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTVFHNSIPASITAAQKLTKLLKSGHFELDERHPEVVVTIGGDGTLLSAFHRYADQLN CEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHC SIRFIGVHTGHLGFYTDWRDFEIEDLVIALKEDSGQSVSYPLLDVQATYADATSAHYLAL CEEEEEEEECCEEEEECCCCCCCEEEEEEEECCCCCEEECCEEEEEEECCCCCCEEEEEE NESTLKRLNGTMRTEVYIKGDFFESFRGDGLCVSTPTGSTAYSKSNGGAVIHPRLDALQM CHHHHHHHCCCEEEEEEEEECHHHHHCCCCEEEECCCCCCCEECCCCCEEEECCCCHHHH TEIASINNRVFRTLSSPIITAPDEWVTLEPTGRDDYVMTVDQFVINPPTIKQIRYKIAKE HHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCCEEEEEEHEEECCCHHHHHHHHHHHH RIHFARYRHMHFWDRVEDAFIGAKH HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRVTVFHNSIPASITAAQKLTKLLKSGHFELDERHPEVVVTIGGDGTLLSAFHRYADQLN CEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHC SIRFIGVHTGHLGFYTDWRDFEIEDLVIALKEDSGQSVSYPLLDVQATYADATSAHYLAL CEEEEEEEECCEEEEECCCCCCCEEEEEEEECCCCCEEECCEEEEEEECCCCCCEEEEEE NESTLKRLNGTMRTEVYIKGDFFESFRGDGLCVSTPTGSTAYSKSNGGAVIHPRLDALQM CHHHHHHHCCCEEEEEEEEECHHHHHCCCCEEEECCCCCCCEECCCCCEEEECCCCHHHH TEIASINNRVFRTLSSPIITAPDEWVTLEPTGRDDYVMTVDQFVINPPTIKQIRYKIAKE HHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCCEEEEEEHEEECCCHHHHHHHHHHHH RIHFARYRHMHFWDRVEDAFIGAKH HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA