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The map label for this gene is 116494396

Identifier: 116494396

GI number: 116494396

Start: 864255

End: 864470

Strand: Direct

Name: 116494396

Synonym: LSEI_0887

Alternate gene names: NA

Gene position: 864255-864470 (Clockwise)

Preceding gene: 116494395

Following gene: 116494399

Centisome position: 29.85

GC content: 41.67

Gene sequence:

>216_bases
ATGGATCAACAACAGTACGTCTGCCCCAAATGCCAAAACACGGCTTATGTTGCCGACCAATTTCAAGCAACTGGTGGTAA
TTTTTCAAAAATCTTCGATGTTCAGAATAAAAAATTCGTGACTATTTCTTGTACCAGATGCGGGTACACAGAACTTTATC
GCAGTGAAACCAGTTCTGGCATGAACATTCTCGACTTCCTTTTGAATGGCGGCTGA

Upstream 100 bases:

>100_bases
AGCGAGAGATTTTGTTTGTTACAGGAGTTTAAGAGAGCGGCCTTGATTAGGCGAACCAAGATGGCTACTTTGACAAACAT
GATTAGAAAGGGTGCGGGTC

Downstream 100 bases:

>100_bases
GAAGGCGTAAGTTCAGCTTAGGAATGATGTCAAAAAAGCAGGTGATCCTTCAGCCGTCGTTGTGGCGGAAAGGGATCATC
TGCTTTTTGTTTGCTGCTTG

Product: Zn-ribbon nucleic-acid-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MDQQQYVCPKCQNTAYVADQFQATGGNFSKIFDVQNKKFVTISCTRCGYTELYRSETSSGMNILDFLLNGG

Sequences:

>Translated_71_residues
MDQQQYVCPKCQNTAYVADQFQATGGNFSKIFDVQNKKFVTISCTRCGYTELYRSETSSGMNILDFLLNGG
>Mature_71_residues
MDQQQYVCPKCQNTAYVADQFQATGGNFSKIFDVQNKKFVTISCTRCGYTELYRSETSSGMNILDFLLNGG

Specific function: Unknown

COG id: COG3478

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7976; Mature: 7976

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQQYVCPKCQNTAYVADQFQATGGNFSKIFDVQNKKFVTISCTRCGYTELYRSETSSG
CCCCCCCCCCCCCCEEECCCEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHCCCCCC
MNILDFLLNGG
CCEEHHEECCC
>Mature Secondary Structure
MDQQQYVCPKCQNTAYVADQFQATGGNFSKIFDVQNKKFVTISCTRCGYTELYRSETSSG
CCCCCCCCCCCCCCEEECCCEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHCCCCCC
MNILDFLLNGG
CCEEHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA