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The map label for this gene is 116494366

Identifier: 116494366

GI number: 116494366

Start: 819063

End: 819686

Strand: Direct

Name: 116494366

Synonym: LSEI_0822

Alternate gene names: NA

Gene position: 819063-819686 (Clockwise)

Preceding gene: 116494365

Following gene: 116494367

Centisome position: 28.29

GC content: 46.63

Gene sequence:

>624_bases
ATGAAGCGTATTGCCCAATGGGTAGCATTGTGGCTAGCCATCATTAGTGTCCTTGTGTTCATGACGATTTTAAGTACGCT
GATCACTTTTCCAGTTTATGCACACATGGATGACCTACCGCAGATTGCCGTGATGTCCCTTGGCCGGCTTTATCAGAATT
ATTTGCAGCTGATGGCTTACTTAAATTTACCGTGGGTTGGTACTCTGCATATGAATGATTTCCCCACAAGCGTACATGGC
GCCATTCATTTTGCGGATGTTCGCCACCTCTTTCTCTTCGATATAGGGGTTGCTGTGGTCACGGTCCCATTTGCGGTACG
CTGGTTGCATCAACTTCGCATTGCCAGAAAAAGATATTTGTTGGTTCGTCCGTTTATGATTGGGGCCGTGGTACCTGTTG
TGTTGACGGCTATATTAGCGGTAAACTTCGACCAATTTTTCATCACGTTTCATGAAGTCCTTTTTCGCAATAGCGACTGG
CTGTTTGACCCGGCGACTGATCCGATCATCAACGTTTTGCCTGAAGGATTCTTCATGTTGTGTTTTCTGACAGCATTTGC
TTTGTTTGAAGCTGTCATGATCTGGGGCATTTGGCGCGGGCGTCAAGATGCGAAGGTGGCATGA

Upstream 100 bases:

>100_bases
TAGTGTATACCGGCGTTTCTACTCGTGATTATGTTTCCAAGCAAGTCCATCAGCCCACACATCAGATTGATGCCTTGACG
GATTGGGAGGTCTAACCTCC

Downstream 100 bases:

>100_bases
TTGGCAGCGCAAGCAAAAACGCATCGCTTGTCACGTGGAATTTACCACTTGACAGGCGATGCGTTTTTTTGATGCAAATC
ATTTTGCTCAGCGTTCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein TIGR; Rhodopsin-Like GPCR Superfamily Membrane Protein

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKRIAQWVALWLAIISVLVFMTILSTLITFPVYAHMDDLPQIAVMSLGRLYQNYLQLMAYLNLPWVGTLHMNDFPTSVHG
AIHFADVRHLFLFDIGVAVVTVPFAVRWLHQLRIARKRYLLVRPFMIGAVVPVVLTAILAVNFDQFFITFHEVLFRNSDW
LFDPATDPIINVLPEGFFMLCFLTAFALFEAVMIWGIWRGRQDAKVA

Sequences:

>Translated_207_residues
MKRIAQWVALWLAIISVLVFMTILSTLITFPVYAHMDDLPQIAVMSLGRLYQNYLQLMAYLNLPWVGTLHMNDFPTSVHG
AIHFADVRHLFLFDIGVAVVTVPFAVRWLHQLRIARKRYLLVRPFMIGAVVPVVLTAILAVNFDQFFITFHEVLFRNSDW
LFDPATDPIINVLPEGFFMLCFLTAFALFEAVMIWGIWRGRQDAKVA
>Mature_207_residues
MKRIAQWVALWLAIISVLVFMTILSTLITFPVYAHMDDLPQIAVMSLGRLYQNYLQLMAYLNLPWVGTLHMNDFPTSVHG
AIHFADVRHLFLFDIGVAVVTVPFAVRWLHQLRIARKRYLLVRPFMIGAVVPVVLTAILAVNFDQFFITFHEVLFRNSDW
LFDPATDPIINVLPEGFFMLCFLTAFALFEAVMIWGIWRGRQDAKVA

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23842; Mature: 23842

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIAQWVALWLAIISVLVFMTILSTLITFPVYAHMDDLPQIAVMSLGRLYQNYLQLMAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNLPWVGTLHMNDFPTSVHGAIHFADVRHLFLFDIGVAVVTVPFAVRWLHQLRIARKRYL
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRPFMIGAVVPVVLTAILAVNFDQFFITFHEVLFRNSDWLFDPATDPIINVLPEGFFML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
CFLTAFALFEAVMIWGIWRGRQDAKVA
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKRIAQWVALWLAIISVLVFMTILSTLITFPVYAHMDDLPQIAVMSLGRLYQNYLQLMAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNLPWVGTLHMNDFPTSVHGAIHFADVRHLFLFDIGVAVVTVPFAVRWLHQLRIARKRYL
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRPFMIGAVVPVVLTAILAVNFDQFFITFHEVLFRNSDWLFDPATDPIINVLPEGFFML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
CFLTAFALFEAVMIWGIWRGRQDAKVA
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA