| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494362
Identifier: 116494362
GI number: 116494362
Start: 815488
End: 816090
Strand: Direct
Name: 116494362
Synonym: LSEI_0818
Alternate gene names: NA
Gene position: 815488-816090 (Clockwise)
Preceding gene: 116494361
Following gene: 116494363
Centisome position: 28.17
GC content: 44.61
Gene sequence:
>603_bases ATGCAGTATTTCATTGCAGACACTCATTTTTTTCACGCCGATCTATTAGGCCAAAACGATTTTGCACCGCGACTTTTCCC CTCTGTTGAGGCTATGGACACGGCAATGATCAATGCTTGGAATGCTCGCGTGGGGGATCGGGATATTGTCTATCATTTAG GCGATATCGCGATGAATCCTGAGCATTTTCCGCAACCACCAGAAGTGCTTGGTATATTAAAACAGCTGAACGGTCGAATT GTCTTCATTAAAGGGAACCATGATTATGAGTCACTGTTCAAGTTTCTTCATCGAAATGATCCTGGTGTGAATGGACAGCC AAAATTCACGTTTCATGATGTTGGCACCATTATTAAGGACGACCATACACAATTCATTATGACGCACTACCCGTTGATGA TGGGGATTGTCAAACAAACACTGAATTTACATGGTCATATTCATCACAACAGCGTCAATCTCGCGGAGAATATTAATGTC GGGGTAGATGCACCGGAACGCGATTTGTTGATGCCACACCTGCCATTTGGAACACCGCTGTCCGCTGCTGAAGTGCATGA AATTTATCGGCTTAAGGCCCAGGCGTTAGCCCAAAATCGATGA
Upstream 100 bases:
>100_bases TTGTTGCAAGTCTTGATTTCGGTCATTGCCGTTGTTTTGACGGTACCGATGACAACTTGGGTTGTGACAACTCGTCATGC GCATCGCAGAAAGGAATAAT
Downstream 100 bases:
>100_bases ACAACCGTTTGTTTGACCGCCCGCTTATCAGAGCATAGGATAAAAATAAGAAAGCGCGCCGGTGATTCACCAGTTAGAGT ATTTATTTTTGCCGGCACAG
Product: phosphoesterase or phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MQYFIADTHFFHADLLGQNDFAPRLFPSVEAMDTAMINAWNARVGDRDIVYHLGDIAMNPEHFPQPPEVLGILKQLNGRI VFIKGNHDYESLFKFLHRNDPGVNGQPKFTFHDVGTIIKDDHTQFIMTHYPLMMGIVKQTLNLHGHIHHNSVNLAENINV GVDAPERDLLMPHLPFGTPLSAAEVHEIYRLKAQALAQNR
Sequences:
>Translated_200_residues MQYFIADTHFFHADLLGQNDFAPRLFPSVEAMDTAMINAWNARVGDRDIVYHLGDIAMNPEHFPQPPEVLGILKQLNGRI VFIKGNHDYESLFKFLHRNDPGVNGQPKFTFHDVGTIIKDDHTQFIMTHYPLMMGIVKQTLNLHGHIHHNSVNLAENINV GVDAPERDLLMPHLPFGTPLSAAEVHEIYRLKAQALAQNR >Mature_200_residues MQYFIADTHFFHADLLGQNDFAPRLFPSVEAMDTAMINAWNARVGDRDIVYHLGDIAMNPEHFPQPPEVLGILKQLNGRI VFIKGNHDYESLFKFLHRNDPGVNGQPKFTFHDVGTIIKDDHTQFIMTHYPLMMGIVKQTLNLHGHIHHNSVNLAENINV GVDAPERDLLMPHLPFGTPLSAAEVHEIYRLKAQALAQNR
Specific function: Unknown
COG id: COG4186
COG function: function code R; Predicted phosphoesterase or phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 22733; Mature: 22733
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYFIADTHFFHADLLGQNDFAPRLFPSVEAMDTAMINAWNARVGDRDIVYHLGDIAMNP CEEEEECCEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC EHFPQPPEVLGILKQLNGRIVFIKGNHDYESLFKFLHRNDPGVNGQPKFTFHDVGTIIKD CCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCEECC DHTQFIMTHYPLMMGIVKQTLNLHGHIHHNSVNLAENINVGVDAPERDLLMPHLPFGTPL CCCEEHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC SAAEVHEIYRLKAQALAQNR CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQYFIADTHFFHADLLGQNDFAPRLFPSVEAMDTAMINAWNARVGDRDIVYHLGDIAMNP CEEEEECCEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC EHFPQPPEVLGILKQLNGRIVFIKGNHDYESLFKFLHRNDPGVNGQPKFTFHDVGTIIKD CCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCEECC DHTQFIMTHYPLMMGIVKQTLNLHGHIHHNSVNLAENINVGVDAPERDLLMPHLPFGTPL CCCEEHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC SAAEVHEIYRLKAQALAQNR CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]