| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
Click here to switch to the map view.
The map label for this gene is murI [H]
Identifier: 116494343
GI number: 116494343
Start: 795283
End: 796737
Strand: Direct
Name: murI [H]
Synonym: LSEI_0799
Alternate gene names: 116494343
Gene position: 795283-796737 (Clockwise)
Preceding gene: 116494341
Following gene: 116494344
Centisome position: 27.47
GC content: 48.73
Gene sequence:
>1455_bases ATGAACAAGCAACCAATCGGCTTTATTGATTCTGGTGTCGGCGGGCTGACAGTCGTTAAAGAGGCGTTGCATCAGCTGCC AGCTGAAAGCAGTGTTTATCTGGGCGATCAGGCTCGTTTGCCATATGGCCCGCGACCTGCCGAACAAGTACAGGCGTTTA CTTGGCAGATGGTCAATTTCTTGCTTAAAAAGCATATTAAAATGCTCGTCATTGCCTGCAACACTGCCACCGCAGCGGCA TTACCCTTAATTAAGGCTAACTTAGACATACCAGTCATCGGGGTGATCAAACCCGGCAGTCGGGCGGCACTGAAGGCGAC GCAAACTGGTCACATCGGGATTATCGCCACAGAAGGCACCGTTAAAAGCGGTGCTTATGTGAAGGCTTTACGCGCAAAGG CGCCGAAGATTCGCCTAACTAGTCTGGCGGCCCCTAAATTTGTCTCATTGGTGGAAAGTAACGAAGCCCACTCACCCATT GCTAAACGGGTGGTGGCTGACACCTTGCAACCATTGCTGCATGAAGACATTGACACGTTAATTTTAGGTTGTACACATTA CCCGATTCTGCGCCCGTTGATTCAAAATGTGATGGGTGATCAAGTGACCTTAATTGATTCCGGCGCCGAGACTGTGAATG ATGTTTCCATGCTACTTGATTATTTTGATCTAGCAAACAACAGCGGCGACACCCCAACTCACGAATATTACACAACCGGG GCACCATCAATGTTTGACGAACTTGGCGAAGCTTGGCTTGAACTGACGGCGCCGATGCACGCCAAACATGTCAACATTGA GGGTGAGGCAGATCACGCTATGGCTACAGTGCCTGAAGCAAAGGGTAAAACGATTGTCGTTGCCAGCAAAAATCAAGGAA AGATTAAAGAATTTAAAACAATGTTTGAACCTGCTGGCATCACGGTGAAGAGTCTAGCCGACTTTTCAAGCGTGCCAACA GTTGACGAAACTGGCACAACATTTGAGGAGAACGCCCGACAAAAAGCCGATCAGTATGCCAAAGATTTGCAGTTGCCGGT GATTGCAGATGATTCTGGGTTGATGGTCGATGCTTTAGACGGGCAACCTGGTATTCGCTCAGCCCGTTATGCAGGCGATG GTCACAACGATGCAGCTAACAATGCCAAACTATTGGCAGCCTTGGCAGATGTCCCGGAAGATGATCGAACAGCGACTTTT CATACTACCTTGGTGCTTGCTAAACCGGATCATCCGGAAGCAGACTTGGTGGTACATGGTGATGTGAGCGGACTAATCAC TGCGATCCCACGTGGCACAGATGGTTTTGGCTATGATCCATTCTTTTTTGTTCCAGCGTTAGGGAAGACAATGGCGGAAA TGACCGCTGAAGAAAAAAATCAAATTAGTCATCGCGGGAACGCAATGAGGGCACTTGAAGATGTTTGGCAAACATGGTTG GAGGCAAACGGATGA
Upstream 100 bases:
>100_bases GAGGCAGAACATTTTAAAAAGAATCCTATGCAGACATTTTGGCAACATGAACTACTTTGCTTGCCATCCCTGCAAACCTG TTTCAAAAGGAGAATATTTC
Downstream 100 bases:
>100_bases AAATTTTAGCAGTTAGCGATACCCACGGTGATCGAGAGATTCTCACAGCTTTGTTGAAACAACAGCCGCATCTTGATGGC TATTTCTATGCCGGTGACTC
Product: bifunctional glutamate racemase/xanthosine/inosine pyrophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MNKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLLKKHIKMLVIACNTATAAA LPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPI AKRVVADTLQPLLHEDIDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEYYTTG APSMFDELGEAWLELTAPMHAKHVNIEGEADHAMATVPEAKGKTIVVASKNQGKIKEFKTMFEPAGITVKSLADFSSVPT VDETGTTFEENARQKADQYAKDLQLPVIADDSGLMVDALDGQPGIRSARYAGDGHNDAANNAKLLAALADVPEDDRTATF HTTLVLAKPDHPEADLVVHGDVSGLITAIPRGTDGFGYDPFFFVPALGKTMAEMTAEEKNQISHRGNAMRALEDVWQTWL EANG
Sequences:
>Translated_484_residues MNKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLLKKHIKMLVIACNTATAAA LPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPI AKRVVADTLQPLLHEDIDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEYYTTG APSMFDELGEAWLELTAPMHAKHVNIEGEADHAMATVPEAKGKTIVVASKNQGKIKEFKTMFEPAGITVKSLADFSSVPT VDETGTTFEENARQKADQYAKDLQLPVIADDSGLMVDALDGQPGIRSARYAGDGHNDAANNAKLLAALADVPEDDRTATF HTTLVLAKPDHPEADLVVHGDVSGLITAIPRGTDGFGYDPFFFVPALGKTMAEMTAEEKNQISHRGNAMRALEDVWQTWL EANG >Mature_484_residues MNKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFLLKKHIKMLVIACNTATAAA LPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGTVKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPI AKRVVADTLQPLLHEDIDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEYYTTG APSMFDELGEAWLELTAPMHAKHVNIEGEADHAMATVPEAKGKTIVVASKNQGKIKEFKTMFEPAGITVKSLADFSSVPT VDETGTTFEENARQKADQYAKDLQLPVIADDSGLMVDALDGQPGIRSARYAGDGHNDAANNAKLLAALADVPEDDRTATF HTTLVLAKPDHPEADLVVHGDVSGLITAIPRGTDGFGYDPFFFVPALGKTMAEMTAEEKNQISHRGNAMRALEDVWQTWL EANG
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI1789324, Length=195, Percent_Identity=48.2051282051282, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI87082355, Length=221, Percent_Identity=33.4841628959276, Blast_Score=109, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 51987; Mature: 51987
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNF CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHH LLKKHIKMLVIACNTATAAALPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGT HHHHHHEEEEEEECCHHHHHHHHEECCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCC VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHEDIDTL CCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHH ILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEYYTTG HCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC APSMFDELGEAWLELTAPMHAKHVNIEGEADHAMATVPEAKGKTIVVASKNQGKIKEFKT CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCEEEEECCCCCHHHHHHH MFEPAGITVKSLADFSSVPTVDETGTTFEENARQKADQYAKDLQLPVIADDSGLMVDALD HHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECC GQPGIRSARYAGDGHNDAANNAKLLAALADVPEDDRTATFHTTLVLAKPDHPEADLVVHG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCEEEEC DVSGLITAIPRGTDGFGYDPFFFVPALGKTMAEMTAEEKNQISHRGNAMRALEDVWQTWL CCCCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EANG HCCC >Mature Secondary Structure MNKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNF CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHH LLKKHIKMLVIACNTATAAALPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGT HHHHHHEEEEEEECCHHHHHHHHEECCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCC VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEAHSPIAKRVVADTLQPLLHEDIDTL CCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHH ILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEYYTTG HCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC APSMFDELGEAWLELTAPMHAKHVNIEGEADHAMATVPEAKGKTIVVASKNQGKIKEFKT CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCEEEEECCCCCHHHHHHH MFEPAGITVKSLADFSSVPTVDETGTTFEENARQKADQYAKDLQLPVIADDSGLMVDALD HHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECC GQPGIRSARYAGDGHNDAANNAKLLAALADVPEDDRTATFHTTLVLAKPDHPEADLVVHG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCEEEEC DVSGLITAIPRGTDGFGYDPFFFVPALGKTMAEMTAEEKNQISHRGNAMRALEDVWQTWL CCCCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EANG HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA