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The map label for this gene is 116493918

Identifier: 116493918

GI number: 116493918

Start: 351974

End: 352576

Strand: Direct

Name: 116493918

Synonym: LSEI_0351

Alternate gene names: NA

Gene position: 351974-352576 (Clockwise)

Preceding gene: 116493917

Following gene: 116493919

Centisome position: 12.16

GC content: 57.05

Gene sequence:

>603_bases
GTGACAGAATCAATTCAGAGCACCACTGCCCGCATTATTAGACAGCTATACGGAAACTCGGAACCGAATAAGGCCGTTCT
TGCGGGGCTCAGAGGAGCCAGTCGGTTTACTGATGTTCAGGCGCGGTCGGCATGGCCAATCATCCTGGACGGGCTGGACG
ATCAATACCTGAGCCGTGATGGCATCCCAACGTATGGCGAGCAGGCCATTTTCACTGCCACCCATCTGTATGCCGTCCAT
CAGCAGGGGCACGATCAGAGCGTTTATGGGTCGGCCGATCCCAAGCGCGATGACAATGGCTTCCCGGTGTTCAAGGCGTT
GTCGATGTTGCGGACGCGGGCAGATAGTAAGACGGCCATCGATCGGCGAGTGCGGCAGGCGCTGGCCCTGACCAACTACG
AGGCGGTCGTGAATGCGCTGGGCAGCTTGATCGGCATTGTGAAGGCGACCAAGCTGCCGCTGAAGCTAGATTACGCGCAG
CTGGCGGAGGACTTGTACTGGTTTCAGATGAGCTACGAACAGGCGAGTCGGGTGCGACTGCGCTGGGGGCAAGATTATTA
TGGGACTGTTTCCGCAAACGAAAGGACAGAGCAAAATGACTAA

Upstream 100 bases:

>100_bases
TAACAGACGAGAATGGCAATGAAACCAACATTTTCATTGCCTATCGCCAGTTGCTCGGACGTGTGTCCGAGCAACTCGGT
GATCGAAAGGGGGAAGTCAA

Downstream 100 bases:

>100_bases
CAAAAACCTCTACATCGACATTCACGTGCTTCAGACGGTTCCTTCCGCCAACATCAACCGGGATGACACGGGCGCGCCCA
AGAAGGCGTTATATGGTGGC

Product: CRISPR-associated protein

Products: NA

Alternate protein names: Cse2 Family CRISPR-Associated Protein

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTESIQSTTARIIRQLYGNSEPNKAVLAGLRGASRFTDVQARSAWPIILDGLDDQYLSRDGIPTYGEQAIFTATHLYAVH
QQGHDQSVYGSADPKRDDNGFPVFKALSMLRTRADSKTAIDRRVRQALALTNYEAVVNALGSLIGIVKATKLPLKLDYAQ
LAEDLYWFQMSYEQASRVRLRWGQDYYGTVSANERTEQND

Sequences:

>Translated_200_residues
MTESIQSTTARIIRQLYGNSEPNKAVLAGLRGASRFTDVQARSAWPIILDGLDDQYLSRDGIPTYGEQAIFTATHLYAVH
QQGHDQSVYGSADPKRDDNGFPVFKALSMLRTRADSKTAIDRRVRQALALTNYEAVVNALGSLIGIVKATKLPLKLDYAQ
LAEDLYWFQMSYEQASRVRLRWGQDYYGTVSANERTEQND
>Mature_199_residues
TESIQSTTARIIRQLYGNSEPNKAVLAGLRGASRFTDVQARSAWPIILDGLDDQYLSRDGIPTYGEQAIFTATHLYAVHQ
QGHDQSVYGSADPKRDDNGFPVFKALSMLRTRADSKTAIDRRVRQALALTNYEAVVNALGSLIGIVKATKLPLKLDYAQL
AEDLYWFQMSYEQASRVRLRWGQDYYGTVSANERTEQND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22454; Mature: 22323

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESIQSTTARIIRQLYGNSEPNKAVLAGLRGASRFTDVQARSAWPIILDGLDDQYLSRD
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCEEEECCCHHHHCCC
GIPTYGEQAIFTATHLYAVHQQGHDQSVYGSADPKRDDNGFPVFKALSMLRTRADSKTAI
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
DRRVRQALALTNYEAVVNALGSLIGIVKATKLPLKLDYAQLAEDLYWFQMSYEQASRVRL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
RWGQDYYGTVSANERTEQND
EECCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
TESIQSTTARIIRQLYGNSEPNKAVLAGLRGASRFTDVQARSAWPIILDGLDDQYLSRD
CCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCEEEECCCHHHHCCC
GIPTYGEQAIFTATHLYAVHQQGHDQSVYGSADPKRDDNGFPVFKALSMLRTRADSKTAI
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
DRRVRQALALTNYEAVVNALGSLIGIVKATKLPLKLDYAQLAEDLYWFQMSYEQASRVRL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
RWGQDYYGTVSANERTEQND
EECCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA