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The map label for this gene is ymfB [C]

Identifier: 116493839

GI number: 116493839

Start: 272491

End: 272949

Strand: Direct

Name: ymfB [C]

Synonym: LSEI_0271

Alternate gene names: 116493839

Gene position: 272491-272949 (Clockwise)

Preceding gene: 116493838

Following gene: 116493840

Centisome position: 9.41

GC content: 43.79

Gene sequence:

>459_bases
TTGCGATTAAAAAAAGGGATGAAACATTTGGATCGCCTATATCAATGTGAACTGACAAATTTCTGCCTTATTCGGTATCA
GCATCAATTGCTGATGATGGCAAAGAATGATTCTGAGTTCGAGCCATCGTTGACTTTTCCCGGTGGCCATGTCGAGCCTG
ACGAATCGTTGACGGCTTCTGTTGTGCGTGAGGTGAAAGAAGAAACCAGCTTGGATGTCAATGATCCGCAACTTTGCAGT
ATCGTTAACTTTGTCACAGGACCCAAAACGCGTGAGTTCATCTTTGCGTATGCCACAACTGTGTCACAAAAAATGACGAC
CCAACCGCAAGTAGGTACCAAAGATGAAGGCAGGACTTTTTGGATAGACATTGATCAAATCAAACCGAGTCAACTGAATA
CGGTTGTCGCAGATGTGTTGCAAGACTATCGCAGTGGTATTGTCAGAGAACATGATTAG

Upstream 100 bases:

>100_bases
AGTGCGGAAGTGGATAAGGCAACTGATTTGTATCAGTTGGGTTTTTATCAGTATTGTAAACAGTATGGCAATCCTTTCTT
TTAAAGGATGAGTTCATCTG

Downstream 100 bases:

>100_bases
GGTCTGTACTAGAATTTCGGACAGAAACATAAGAGAATTGATTTATCCGAAAGGAGTCCTCAAAATGACCTATTCACGCA
ATCGCTACGACCAAGATTTT

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: MutT/NUDIX Family Protein; NUDIX Hydrolase; Mutator Protein; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; MutT/Nudix Family Phosphohydrolase; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Mutt/Nudix Family Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRLKKGMKHLDRLYQCELTNFCLIRYQHQLLMMAKNDSEFEPSLTFPGGHVEPDESLTASVVREVKEETSLDVNDPQLCS
IVNFVTGPKTREFIFAYATTVSQKMTTQPQVGTKDEGRTFWIDIDQIKPSQLNTVVADVLQDYRSGIVREHD

Sequences:

>Translated_152_residues
MRLKKGMKHLDRLYQCELTNFCLIRYQHQLLMMAKNDSEFEPSLTFPGGHVEPDESLTASVVREVKEETSLDVNDPQLCS
IVNFVTGPKTREFIFAYATTVSQKMTTQPQVGTKDEGRTFWIDIDQIKPSQLNTVVADVLQDYRSGIVREHD
>Mature_152_residues
MRLKKGMKHLDRLYQCELTNFCLIRYQHQLLMMAKNDSEFEPSLTFPGGHVEPDESLTASVVREVKEETSLDVNDPQLCS
IVNFVTGPKTREFIFAYATTVSQKMTTQPQVGTKDEGRTFWIDIDQIKPSQLNTVVADVLQDYRSGIVREHD

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17427; Mature: 17427

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKKGMKHLDRLYQCELTNFCLIRYQHQLLMMAKNDSEFEPSLTFPGGHVEPDESLTAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
VVREVKEETSLDVNDPQLCSIVNFVTGPKTREFIFAYATTVSQKMTTQPQVGTKDEGRTF
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
WIDIDQIKPSQLNTVVADVLQDYRSGIVREHD
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLKKGMKHLDRLYQCELTNFCLIRYQHQLLMMAKNDSEFEPSLTFPGGHVEPDESLTAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
VVREVKEETSLDVNDPQLCSIVNFVTGPKTREFIFAYATTVSQKMTTQPQVGTKDEGRTF
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
WIDIDQIKPSQLNTVVADVLQDYRSGIVREHD
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA