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The map label for this gene is 116493795

Identifier: 116493795

GI number: 116493795

Start: 219481

End: 220233

Strand: Direct

Name: 116493795

Synonym: LSEI_0224

Alternate gene names: NA

Gene position: 219481-220233 (Clockwise)

Preceding gene: 116493794

Following gene: 116493796

Centisome position: 7.58

GC content: 45.42

Gene sequence:

>753_bases
ATGCGTCAATTTTTCACCGTTATTGGCGGCATGGGCACGCCGGCAACCGAGAGTTATGTCCGTTTGTTAAACCAGCGTAC
CCACGCGCACAGCGATCAGGAATATCTGAATTACATTCTGGTTAACGATGCGACTGTTCCTGACCGTACGGATTACATTT
TGGATCATAGCAAGCCTAGCTTTTATCCGGATTTGTTGGAAGACATTCAAGATCAAAGTTTACTCAATCCAGAGTTCATG
GTCATTGTCTGCAACACGGCTCATTATTTCTATGACCAATTAGCCGCAGCGACACCAATTCCATTGCTACACATGCCACA
TTTAGCCATCAGCGATATGTGTGAGCGTTTTCCAGATGAAAAGCGGGTGGGACTGATTGCGACCCAAGGAACGATCCAAG
ACGGCATTTACAGTCATGAAATCGAAACTAGCGGGCGTGAAGTCGTTCTTGGCGATCAGGCGCTGCAAGACATGGTCACT
GAGTTGATTTATAAATACGTCAAGGAAAAGGGCGAAGTCAACGCGGCCCTGTATCATCGTATTCTTCAACGGATGCATGA
CGATTTTAATGTCAACGTCATTGTCCTTGGCTGTACTGAGCTATCGTTTGCACAGGAAAAAGCCGGTGATCATCCGTATC
ATGTGATTGATGCGCAAAGTATTATTGTTGATAAAACAATTGCGTTAGGCAAAGCTTTCCGTCAAAGTGAAGCAGCTGGA
AAGGCATTGTTGAATCAAATGATGGCGCGTTAA

Upstream 100 bases:

>100_bases
CCGACCCCTATCAAAAGGTACGCGGCGTCAACACACCATGGCCAACAGACATGGCTGTTGTAAAGCAAGTCGCTAAATCG
CTACAGGAAGGCTGATACGA

Downstream 100 bases:

>100_bases
TAGCGTGTTAAAAGAAGGTGCTTGGTTTTGCTAGATGTCTTAGCAACCAAGCATTTTTTGAATGCTAAGAAAGACAACTG
ATCAGGATATCGCTATTTTT

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRQFFTVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPSFYPDLLEDIQDQSLLNPEFM
VIVCNTAHYFYDQLAAATPIPLLHMPHLAISDMCERFPDEKRVGLIATQGTIQDGIYSHEIETSGREVVLGDQALQDMVT
ELIYKYVKEKGEVNAALYHRILQRMHDDFNVNVIVLGCTELSFAQEKAGDHPYHVIDAQSIIVDKTIALGKAFRQSEAAG
KALLNQMMAR

Sequences:

>Translated_250_residues
MRQFFTVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPSFYPDLLEDIQDQSLLNPEFM
VIVCNTAHYFYDQLAAATPIPLLHMPHLAISDMCERFPDEKRVGLIATQGTIQDGIYSHEIETSGREVVLGDQALQDMVT
ELIYKYVKEKGEVNAALYHRILQRMHDDFNVNVIVLGCTELSFAQEKAGDHPYHVIDAQSIIVDKTIALGKAFRQSEAAG
KALLNQMMAR
>Mature_250_residues
MRQFFTVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPSFYPDLLEDIQDQSLLNPEFM
VIVCNTAHYFYDQLAAATPIPLLHMPHLAISDMCERFPDEKRVGLIATQGTIQDGIYSHEIETSGREVVLGDQALQDMVT
ELIYKYVKEKGEVNAALYHRILQRMHDDFNVNVIVLGCTELSFAQEKAGDHPYHVIDAQSIIVDKTIALGKAFRQSEAAG
KALLNQMMAR

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 28261; Mature: 28261

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQFFTVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPS
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCCCCEEECCCCC
FYPDLLEDIQDQSLLNPEFMVIVCNTAHYFYDQLAAATPIPLLHMPHLAISDMCERFPDE
CCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCC
KRVGLIATQGTIQDGIYSHEIETSGREVVLGDQALQDMVTELIYKYVKEKGEVNAALYHR
CCEEEEEECCCHHCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ILQRMHDDFNVNVIVLGCTELSFAQEKAGDHPYHVIDAQSIIVDKTIALGKAFRQSEAAG
HHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
KALLNQMMAR
HHHHHHHHCC
>Mature Secondary Structure
MRQFFTVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPS
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCCCCEEECCCCC
FYPDLLEDIQDQSLLNPEFMVIVCNTAHYFYDQLAAATPIPLLHMPHLAISDMCERFPDE
CCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCC
KRVGLIATQGTIQDGIYSHEIETSGREVVLGDQALQDMVTELIYKYVKEKGEVNAALYHR
CCEEEEEECCCHHCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ILQRMHDDFNVNVIVLGCTELSFAQEKAGDHPYHVIDAQSIIVDKTIALGKAFRQSEAAG
HHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
KALLNQMMAR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]