| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493766
Identifier: 116493766
GI number: 116493766
Start: 196192
End: 196434
Strand: Direct
Name: 116493766
Synonym: LSEI_0195
Alternate gene names: NA
Gene position: 196192-196434 (Clockwise)
Preceding gene: 116493765
Following gene: 116493767
Centisome position: 6.78
GC content: 46.09
Gene sequence:
>243_bases ATGAGCGAAGAAATTGTTTTCTTCAACCCCGGCGATGCAGTCGCCAATGATTTTGATTTCGCCGCGGCTCGACGCAGTGC CCAAATTTACAAAGCCGAACATGTTGTCGATGAAGGCTTGGTTGTCGCTAAAGATAAAGACGGCAAGTATTCCGTTTTTT ACGAAGCTGCCGGAACGCCTGATTCAAAGGCTAAAGGTGACTATAAAGCAGTTGGCAAGTATACGATTCTGGCTCATCTA TGA
Upstream 100 bases:
>100_bases CATTTACCAAAAGCCTGATAGCCAAGGCTGAGGCGCTTCAAGCTGATAAGTGAGACGATGTTGACGTGGTATAATGAAGC CAGAAAGCGAGGGGATCTTC
Downstream 100 bases:
>100_bases CGAAAACGGCGTGGTACCGTATTGTCTTGGTGCTCATTGCCGTGGGCTTAATTGGCGTTCTTGATCTTGTCATGACTCAA AATCAGATCGCCAATCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSEEIVFFNPGDAVANDFDFAAARRSAQIYKAEHVVDEGLVVAKDKDGKYSVFYEAAGTPDSKAKGDYKAVGKYTILAHL
Sequences:
>Translated_80_residues MSEEIVFFNPGDAVANDFDFAAARRSAQIYKAEHVVDEGLVVAKDKDGKYSVFYEAAGTPDSKAKGDYKAVGKYTILAHL >Mature_79_residues SEEIVFFNPGDAVANDFDFAAARRSAQIYKAEHVVDEGLVVAKDKDGKYSVFYEAAGTPDSKAKGDYKAVGKYTILAHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8719; Mature: 8588
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEIVFFNPGDAVANDFDFAAARRSAQIYKAEHVVDEGLVVAKDKDGKYSVFYEAAGTP CCCCEEEECCCCCCCCCCCCHHHHCCCCEEHHCEECCCCEEEEECCCCCEEEEEEECCCC DSKAKGDYKAVGKYTILAHL CCCCCCCEEECCEEEEEEEC >Mature Secondary Structure SEEIVFFNPGDAVANDFDFAAARRSAQIYKAEHVVDEGLVVAKDKDGKYSVFYEAAGTP CCCEEEECCCCCCCCCCCCHHHHCCCCEEHHCEECCCCEEEEECCCCCEEEEEEECCCC DSKAKGDYKAVGKYTILAHL CCCCCCCEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA