Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is ygcG [C]

Identifier: 116493759

GI number: 116493759

Start: 191344

End: 192657

Strand: Direct

Name: ygcG [C]

Synonym: LSEI_0188

Alternate gene names: 116493759

Gene position: 191344-192657 (Clockwise)

Preceding gene: 116493758

Following gene: 116493760

Centisome position: 6.61

GC content: 50.38

Gene sequence:

>1314_bases
ATGCACAAATATCTTTGGTGGCTCATCCCGCTTGTCTTGCTACTTGGTATTGGGGCAGCAACGCAACAGTCGGTTCAAGC
GGCTTCGGGAACATGGTATCGCGATGACGGTGACATGATGGGAGCTAAGAGCCAGGCGGCGGTCAATCGTTTGAATAATG
AGACGTTTGCCAAGGTAAAGGGTCATCCTCAACTTGCAGTCATCACGGTCAAGTCGCTTGATGATGACGAAATCGAAGAC
TATGCCAATGATCAGTTTGCTAAATTGGGTATTGGCAAAAAAGGCTGGGACAATGGCTTGCTTCTTGTGCTTTCCCGCGA
AGACCGTAAGTATTGGCTAGAGGTCGGCTATGGGTTAGAAGACGTCGTGCCAGACGGGAGCGCAGACGAGATTGTTACTT
CGAAAGTGAAAACACAGCTGAAGGCGCAGAACTACGATGAGGCAATCGCACTGTTTCTTGATCATATTGGTCAACGCGTG
ACAGCAAACCAAAGTGCCATCGCGACGCCTGCCCAAATAACCGCTAAACGGGCACGTGATGCTGCTATTCAGCAGGCAAT
CTTGATTGCTGCTTTGATTTTGATGGCCTTGCTGGTACTCTTCTTCGTAGTCCACATGGCGATGGCTGCCCGATTGCGTG
ATGCTATGCGTGATACCGTTGCGTTGGAGGCGATGCCGTTGTATGCGGCTGTGATGGCAGCAGGCATTCCGGTACGCCGA
CAGACAGCTTCCTTACCACTATTCAAATTCGCTTGGTCACATGCCAAGCTACGCGAAATCGGTCTGGCCAATTTGGCTCG
TCGTGGTTTCGAGTCGTGGACGCGCGTGCTGCGGTTGACCGCACCATATCCTTATTGGTACTACTACCAAACAAGCAAAC
CACTGCGGCAATTAGCCGATCAAGATGTGGTGGCGGCCCCATCTGTTTCAGCATTAGCAGCGTTATTAACCCCCGCATTA
GCTGATCGTTTTGCAAAAGGCAGACCTTATGAAGCCAGTTATGCCCAGTGGTTAGGCCAACAAAAGAATGTTGCTGGTCA
AGCTGCGGTGACAACTTGGTCGAAATTTCTTGAAAATGTTAAAGAAACGGATCGTTTTTCAGCTGAAATGTTGGCTGCCA
CGTTTGGCGTTATCTTGTTCCATATTCGGCATCCAGAAAAAAATCAGGATTTAAGTCAATACGACTTGCCACTTTGGGTT
GTATCCGACTTTGGGTCGAGTGCCGGCAGCGGTAGCAGCGGCGGTTCTGACAATTTCGGTAGTGGATTTGGCGGTGGCAG
CAGTGGCGGTGGTGGATTTGGCGGCAGTTGGTAA

Upstream 100 bases:

>100_bases
GCTGGTCGAAGGCTCATGGTATCATGAGAGCAACAATTGCAAATTTTGACAGCGCGACTCGATTCGATGAATGCGTCAAA
ACGCGTCAAAGGAGGTTCAC

Downstream 100 bases:

>100_bases
GCAACGGGAATGATATTGAGGGCTTGAAACCTTGTTACCACGTGGGCTAACCTTAGAAAATAAAACAAATTGATGGCGAT
GTTTTCGTTGCCATCCTAAA

Product: beta-propeller domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVKGHPQLAVITVKSLDDDEIED
YANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLEDVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRV
TANQSAIATPAQITAKRARDAAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR
QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLADQDVVAAPSVSALAALLTPAL
ADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENVKETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWV
VSDFGSSAGSGSSGGSDNFGSGFGGGSSGGGGFGGSW

Sequences:

>Translated_437_residues
MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVKGHPQLAVITVKSLDDDEIED
YANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLEDVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRV
TANQSAIATPAQITAKRARDAAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR
QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLADQDVVAAPSVSALAALLTPAL
ADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENVKETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWV
VSDFGSSAGSGSSGGSDNFGSGFGGGSSGGGGFGGSW
>Mature_437_residues
MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVKGHPQLAVITVKSLDDDEIED
YANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLEDVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRV
TANQSAIATPAQITAKRARDAAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR
QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLADQDVVAAPSVSALAALLTPAL
ADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENVKETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWV
VSDFGSSAGSGSSGGSDNFGSGFGGGSSGGGGFGGSW

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47670; Mature: 47670

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVK
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEC
GHPQLAVITVKSLDDDEIEDYANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLE
CCCCEEEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCHH
DVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRVTANQSAIATPAQITAKRARD
HHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHH
AAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLAD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCC
QDVVAAPSVSALAALLTPALADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHH
KETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWVVSDFGSSAGSGSSGGSDNFG
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCC
SGFGGGSSGGGGFGGSW
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVK
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEC
GHPQLAVITVKSLDDDEIEDYANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLE
CCCCEEEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCHH
DVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRVTANQSAIATPAQITAKRARD
HHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHH
AAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLAD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCC
QDVVAAPSVSALAALLTPALADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHH
KETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWVVSDFGSSAGSGSSGGSDNFG
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCC
SGFGGGSSGGGGFGGSW
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA