| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
Click here to switch to the map view.
The map label for this gene is ygcG [C]
Identifier: 116493759
GI number: 116493759
Start: 191344
End: 192657
Strand: Direct
Name: ygcG [C]
Synonym: LSEI_0188
Alternate gene names: 116493759
Gene position: 191344-192657 (Clockwise)
Preceding gene: 116493758
Following gene: 116493760
Centisome position: 6.61
GC content: 50.38
Gene sequence:
>1314_bases ATGCACAAATATCTTTGGTGGCTCATCCCGCTTGTCTTGCTACTTGGTATTGGGGCAGCAACGCAACAGTCGGTTCAAGC GGCTTCGGGAACATGGTATCGCGATGACGGTGACATGATGGGAGCTAAGAGCCAGGCGGCGGTCAATCGTTTGAATAATG AGACGTTTGCCAAGGTAAAGGGTCATCCTCAACTTGCAGTCATCACGGTCAAGTCGCTTGATGATGACGAAATCGAAGAC TATGCCAATGATCAGTTTGCTAAATTGGGTATTGGCAAAAAAGGCTGGGACAATGGCTTGCTTCTTGTGCTTTCCCGCGA AGACCGTAAGTATTGGCTAGAGGTCGGCTATGGGTTAGAAGACGTCGTGCCAGACGGGAGCGCAGACGAGATTGTTACTT CGAAAGTGAAAACACAGCTGAAGGCGCAGAACTACGATGAGGCAATCGCACTGTTTCTTGATCATATTGGTCAACGCGTG ACAGCAAACCAAAGTGCCATCGCGACGCCTGCCCAAATAACCGCTAAACGGGCACGTGATGCTGCTATTCAGCAGGCAAT CTTGATTGCTGCTTTGATTTTGATGGCCTTGCTGGTACTCTTCTTCGTAGTCCACATGGCGATGGCTGCCCGATTGCGTG ATGCTATGCGTGATACCGTTGCGTTGGAGGCGATGCCGTTGTATGCGGCTGTGATGGCAGCAGGCATTCCGGTACGCCGA CAGACAGCTTCCTTACCACTATTCAAATTCGCTTGGTCACATGCCAAGCTACGCGAAATCGGTCTGGCCAATTTGGCTCG TCGTGGTTTCGAGTCGTGGACGCGCGTGCTGCGGTTGACCGCACCATATCCTTATTGGTACTACTACCAAACAAGCAAAC CACTGCGGCAATTAGCCGATCAAGATGTGGTGGCGGCCCCATCTGTTTCAGCATTAGCAGCGTTATTAACCCCCGCATTA GCTGATCGTTTTGCAAAAGGCAGACCTTATGAAGCCAGTTATGCCCAGTGGTTAGGCCAACAAAAGAATGTTGCTGGTCA AGCTGCGGTGACAACTTGGTCGAAATTTCTTGAAAATGTTAAAGAAACGGATCGTTTTTCAGCTGAAATGTTGGCTGCCA CGTTTGGCGTTATCTTGTTCCATATTCGGCATCCAGAAAAAAATCAGGATTTAAGTCAATACGACTTGCCACTTTGGGTT GTATCCGACTTTGGGTCGAGTGCCGGCAGCGGTAGCAGCGGCGGTTCTGACAATTTCGGTAGTGGATTTGGCGGTGGCAG CAGTGGCGGTGGTGGATTTGGCGGCAGTTGGTAA
Upstream 100 bases:
>100_bases GCTGGTCGAAGGCTCATGGTATCATGAGAGCAACAATTGCAAATTTTGACAGCGCGACTCGATTCGATGAATGCGTCAAA ACGCGTCAAAGGAGGTTCAC
Downstream 100 bases:
>100_bases GCAACGGGAATGATATTGAGGGCTTGAAACCTTGTTACCACGTGGGCTAACCTTAGAAAATAAAACAAATTGATGGCGAT GTTTTCGTTGCCATCCTAAA
Product: beta-propeller domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVKGHPQLAVITVKSLDDDEIED YANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLEDVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRV TANQSAIATPAQITAKRARDAAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLADQDVVAAPSVSALAALLTPAL ADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENVKETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWV VSDFGSSAGSGSSGGSDNFGSGFGGGSSGGGGFGGSW
Sequences:
>Translated_437_residues MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVKGHPQLAVITVKSLDDDEIED YANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLEDVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRV TANQSAIATPAQITAKRARDAAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLADQDVVAAPSVSALAALLTPAL ADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENVKETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWV VSDFGSSAGSGSSGGSDNFGSGFGGGSSGGGGFGGSW >Mature_437_residues MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVKGHPQLAVITVKSLDDDEIED YANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLEDVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRV TANQSAIATPAQITAKRARDAAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLADQDVVAAPSVSALAALLTPAL ADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENVKETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWV VSDFGSSAGSGSSGGSDNFGSGFGGGSSGGGGFGGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47670; Mature: 47670
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVK CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEC GHPQLAVITVKSLDDDEIEDYANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLE CCCCEEEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCHH DVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRVTANQSAIATPAQITAKRARD HHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHH AAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLAD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCC QDVVAAPSVSALAALLTPALADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHH KETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWVVSDFGSSAGSGSSGGSDNFG HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCC SGFGGGSSGGGGFGGSW CCCCCCCCCCCCCCCCC >Mature Secondary Structure MHKYLWWLIPLVLLLGIGAATQQSVQAASGTWYRDDGDMMGAKSQAAVNRLNNETFAKVK CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEC GHPQLAVITVKSLDDDEIEDYANDQFAKLGIGKKGWDNGLLLVLSREDRKYWLEVGYGLE CCCCEEEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCHH DVVPDGSADEIVTSKVKTQLKAQNYDEAIALFLDHIGQRVTANQSAIATPAQITAKRARD HHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHH AAIQQAILIAALILMALLVLFFVVHMAMAARLRDAMRDTVALEAMPLYAAVMAAGIPVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH QTASLPLFKFAWSHAKLREIGLANLARRGFESWTRVLRLTAPYPYWYYYQTSKPLRQLAD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCC QDVVAAPSVSALAALLTPALADRFAKGRPYEASYAQWLGQQKNVAGQAAVTTWSKFLENV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHH KETDRFSAEMLAATFGVILFHIRHPEKNQDLSQYDLPLWVVSDFGSSAGSGSSGGSDNFG HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCC SGFGGGSSGGGGFGGSW CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA