Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493752

Identifier: 116493752

GI number: 116493752

Start: 182759

End: 183892

Strand: Direct

Name: 116493752

Synonym: LSEI_0181

Alternate gene names: NA

Gene position: 182759-183892 (Clockwise)

Preceding gene: 116493751

Following gene: 116493755

Centisome position: 6.31

GC content: 50.18

Gene sequence:

>1134_bases
ATGGATATGACGACTAGACCGACACTGCAGCACTTTTTATCTGACACGAAACATGGACCGTATGTTTCGCTTTATATGTC
TTGGCCAGAGAACACCTCGGTTGAGGCCCTGAGGTTGCGGTTCAAAAACATGGTGAAGCATACCAAGAGCGTCATGACCG
AGACTTATCCTGAAACGGACTTTTCGGCATACGCGGCTGAACTTGAGCCATATGAGCAAGATCCAACATTCTGGCAAACC
TGCGAAACAAATGGGTTTGGCATGTTGACAAATGGCGCACAGACGTATGTGACGCCGATGTATGAAGCGGTTGATGAAGT
GGCAATGGTTACTGACATGCCGCAGATTCTGCCACTGATGCTGGATGAGGCAACGGCAACCGACTTTGATATCTTAGCGT
TAAATGCCGACAGCATTCAGATGTATCATAACCACGGGCATCAGGTGCGGCCGATATCGTTGCCAGACGATGCACCGCAG
ACTTTGAAGGGAACGCTAGGCACCGAAATTCGTGGTGGCGAAACGAACAGCGTGTCCCAAGGTGGCGGACGTGTGACCCA
TCACGGGCATAACGAGAAATCAGCGGAAAAAGCCAGCGATCAGCGCCGTTTTTATCAAGCGGTAGATCAGTATGTGCTGG
CGAATCACTCCAATCCACATAAAATGCCACTGGTACTCATGGGGTTAGCGGAAAACGTGGCGGTGTTCCGCGAAATTTCC
AAGAACCATCATCTGTTACCGAAGCTGGCTGTTGTTAAGAGCCCAGCAAACCTTGATTTTGTTGAATTAGACGACTTGTT
GACGCCAGTACGCGAAACTTTGCGCGATCGCCGACGTCAGAACTTTGCCGAGATCATCGAAAATGCTCGCGGAAATGACA
GCTACACGGATCACTTGGAAGAAGTCGTTCAAGCAGCCGTTGCCGGACGAATCGCCATTCTTTTTGTCCAAGCCGGCGCA
CGGATTCATGCGCGTCTTGAAGGCACCCAAATTGAACGCGATTCGATCAATGCACAGCACGCTAATCTTTTAAATGACTT
AGCTGACATCGTCCTTAGTCATGGCGGACAAGTTGAACTGCTGACAGAAGCCTACTTGCCAGTCGAAGTCGGTGCGATGG
TGCGTTACGCATAG

Upstream 100 bases:

>100_bases
CTAATTATAAATAGTATAATTAAAGCGGATTACTTTGCCTTTCATCGTTTTCATTGATACGCTTAAGGTAGGCTAAAGGC
CGGAAGGGAGTTACATCATG

Downstream 100 bases:

>100_bases
GCTTTTTAGTTGAAATGAAAAAGCGACCCGCCAGTTGGTCGCTTTTTTTGTCCGAACGTTTCTGATGAGGGAACTTTGGG
CTAAAATTGTTGCTTATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MDMTTRPTLQHFLSDTKHGPYVSLYMSWPENTSVEALRLRFKNMVKHTKSVMTETYPETDFSAYAAELEPYEQDPTFWQT
CETNGFGMLTNGAQTYVTPMYEAVDEVAMVTDMPQILPLMLDEATATDFDILALNADSIQMYHNHGHQVRPISLPDDAPQ
TLKGTLGTEIRGGETNSVSQGGGRVTHHGHNEKSAEKASDQRRFYQAVDQYVLANHSNPHKMPLVLMGLAENVAVFREIS
KNHHLLPKLAVVKSPANLDFVELDDLLTPVRETLRDRRRQNFAEIIENARGNDSYTDHLEEVVQAAVAGRIAILFVQAGA
RIHARLEGTQIERDSINAQHANLLNDLADIVLSHGGQVELLTEAYLPVEVGAMVRYA

Sequences:

>Translated_377_residues
MDMTTRPTLQHFLSDTKHGPYVSLYMSWPENTSVEALRLRFKNMVKHTKSVMTETYPETDFSAYAAELEPYEQDPTFWQT
CETNGFGMLTNGAQTYVTPMYEAVDEVAMVTDMPQILPLMLDEATATDFDILALNADSIQMYHNHGHQVRPISLPDDAPQ
TLKGTLGTEIRGGETNSVSQGGGRVTHHGHNEKSAEKASDQRRFYQAVDQYVLANHSNPHKMPLVLMGLAENVAVFREIS
KNHHLLPKLAVVKSPANLDFVELDDLLTPVRETLRDRRRQNFAEIIENARGNDSYTDHLEEVVQAAVAGRIAILFVQAGA
RIHARLEGTQIERDSINAQHANLLNDLADIVLSHGGQVELLTEAYLPVEVGAMVRYA
>Mature_377_residues
MDMTTRPTLQHFLSDTKHGPYVSLYMSWPENTSVEALRLRFKNMVKHTKSVMTETYPETDFSAYAAELEPYEQDPTFWQT
CETNGFGMLTNGAQTYVTPMYEAVDEVAMVTDMPQILPLMLDEATATDFDILALNADSIQMYHNHGHQVRPISLPDDAPQ
TLKGTLGTEIRGGETNSVSQGGGRVTHHGHNEKSAEKASDQRRFYQAVDQYVLANHSNPHKMPLVLMGLAENVAVFREIS
KNHHLLPKLAVVKSPANLDFVELDDLLTPVRETLRDRRRQNFAEIIENARGNDSYTDHLEEVVQAAVAGRIAILFVQAGA
RIHARLEGTQIERDSINAQHANLLNDLADIVLSHGGQVELLTEAYLPVEVGAMVRYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42151; Mature: 42151

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTTRPTLQHFLSDTKHGPYVSLYMSWPENTSVEALRLRFKNMVKHTKSVMTETYPETD
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
FSAYAAELEPYEQDPTFWQTCETNGFGMLTNGAQTYVTPMYEAVDEVAMVTDMPQILPLM
HHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LDEATATDFDILALNADSIQMYHNHGHQVRPISLPDDAPQTLKGTLGTEIRGGETNSVSQ
HHCCCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCC
GGGRVTHHGHNEKSAEKASDQRRFYQAVDQYVLANHSNPHKMPLVLMGLAENVAVFREIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHH
KNHHLLPKLAVVKSPANLDFVELDDLLTPVRETLRDRRRQNFAEIIENARGNDSYTDHLE
CCCCCCCHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EVVQAAVAGRIAILFVQAGARIHARLEGTQIERDSINAQHANLLNDLADIVLSHGGQVEL
HHHHHHHHCCEEEEEEECCCEEEEEECCCEECHHCCCHHHHHHHHHHHHHHHHCCCCEEE
LTEAYLPVEVGAMVRYA
EECCCCCEECCHHEECC
>Mature Secondary Structure
MDMTTRPTLQHFLSDTKHGPYVSLYMSWPENTSVEALRLRFKNMVKHTKSVMTETYPETD
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
FSAYAAELEPYEQDPTFWQTCETNGFGMLTNGAQTYVTPMYEAVDEVAMVTDMPQILPLM
HHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LDEATATDFDILALNADSIQMYHNHGHQVRPISLPDDAPQTLKGTLGTEIRGGETNSVSQ
HHCCCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCC
GGGRVTHHGHNEKSAEKASDQRRFYQAVDQYVLANHSNPHKMPLVLMGLAENVAVFREIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHH
KNHHLLPKLAVVKSPANLDFVELDDLLTPVRETLRDRRRQNFAEIIENARGNDSYTDHLE
CCCCCCCHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EVVQAAVAGRIAILFVQAGARIHARLEGTQIERDSINAQHANLLNDLADIVLSHGGQVEL
HHHHHHHHCCEEEEEEECCCEEEEEECCCEECHHCCCHHHHHHHHHHHHHHHHCCCCEEE
LTEAYLPVEVGAMVRYA
EECCCCCEECCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA