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The map label for this gene is yybJ [H]

Identifier: 116493749

GI number: 116493749

Start: 180312

End: 181610

Strand: Direct

Name: yybJ [H]

Synonym: LSEI_0178

Alternate gene names: 116493749

Gene position: 180312-181610 (Clockwise)

Preceding gene: 116493748

Following gene: 116493750

Centisome position: 6.23

GC content: 45.34

Gene sequence:

>1299_bases
TTGTATTTTGAAGATCGCACAAATGGGTTGCTTCGCCAGGTTCACGACTCAGTCATGATGATCTTTATCGGTGCGTCCCC
CGAACGTTTTGCCAGTAGTCAATTACTGTGGCTGCTCCTTTGGTTTGGCTACATGTTGTTACCGATTTTTGCTAGTGCTG
GTATCACGCATACTTATCAGCAGGGACTATATCCTTATTTGAATTTAAGATTTCGCCCGCGAGTCTTAACTTATCTGTGG
CCATTGAAGCAAACCTGGATGATTGAAGCGGGAGTTTTGCTGTTCATGGGTGTTGGGTTTGGATTAGCCTCTTTTTTGTT
CTGGCAAGAGCAACAGCTTTTTACAGCCGGCTTGTTTACCGGCTTGATTGTGATGAGTCAACTGCTATTACTGGTCATGG
AAACGGTTCTTGAAGGTTATTTTGGCATCGTCATCGGTGTCGTCGGCCCCTTGGTCATGATTTTCCTGAGTTTTCTTCAA
ATGCCATTGATGCCGTTGCGCTTTGCGATTGGCAGTACCTTTGCGAGCGATCAGCAGTTATTAGGCGCCATCGGGTACCA
GTTGGGTTTGATCATTGGATTAGTCCTTATTCAGATTTTTTATATGCCGGGAAGGTGGGGCGTTATGCCGCAAATCATAC
ATGAGCCAGCAGTTCATTTAGAAGTTGAGCAGTTGTCTGTCACAATTAAACGAAAAAAGATTCTTGATCATCTGTCACTT
TCACTGGTGTCACCAAACATTTACGGCATTGTCGGCCCAAATGGAACGGGTAAATCGGTTTTGTTAAAAACATTGTTGGG
ATTTATTCGGCCATCTGCTGGTAGTGTCAAGATGAATGGCGTACGGGTTGACCCGCGTCATGATCTACCAGTCAGCGTTG
GTGCGATTATTGAGCATCCAGGATTTATTGGTGATCTGAACGGGCACGACAATTTAATGGCATTAGGCAACATTCGCAGT
CAACTTAGTGACGCCGATATACGGGCGATTATGGAAAAGGTCGGCTTAAGCGATGATAGGAAAGCCGTTGCCGATTATTC
ACTTGGCATGATTCAGCGACTTGGCATTGCTCAGGCCATCATGGAAGATCAGCAATTAATCTTGCTTGATGAACCGACTA
ATGCGTTGGATCGTGAAGGGGTGGCTTTTTTGACCGATTTATTAAGAGAGCTTCGTGATCAAGGCAAATTGGTCGTGGTA
GCTAGCCACGATTTCATGTGGCTGCAGCTTTTAGCCGATCAGATTTTTGAATTGACAGGCGGCCAACTTAATAAGCTGGA
AGCTGGGCAACCACTATGA

Upstream 100 bases:

>100_bases
TGTGAGTGGCATGCAAAAACGATGGCAAGTACGACTGCTAAGACAAAGAGTCATCATTGTGATACTGCTATTTGTCGGAC
TTCTCATGGGGTCAGTGGCG

Downstream 100 bases:

>100_bases
AAAAGTTGCATCGACGTCTCTTGGCTGTTGGGCTTTTGGCAATGATTATGATTTTCGTAGCATTGTTTAGTTGGCGTTAT
CAAACACTTAACGCGCCATT

Product: PTS system mannose/fructose/N-acetylgalactosamine-specific component IID

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MYFEDRTNGLLRQVHDSVMMIFIGASPERFASSQLLWLLLWFGYMLLPIFASAGITHTYQQGLYPYLNLRFRPRVLTYLW
PLKQTWMIEAGVLLFMGVGFGLASFLFWQEQQLFTAGLFTGLIVMSQLLLLVMETVLEGYFGIVIGVVGPLVMIFLSFLQ
MPLMPLRFAIGSTFASDQQLLGAIGYQLGLIIGLVLIQIFYMPGRWGVMPQIIHEPAVHLEVEQLSVTIKRKKILDHLSL
SLVSPNIYGIVGPNGTGKSVLLKTLLGFIRPSAGSVKMNGVRVDPRHDLPVSVGAIIEHPGFIGDLNGHDNLMALGNIRS
QLSDADIRAIMEKVGLSDDRKAVADYSLGMIQRLGIAQAIMEDQQLILLDEPTNALDREGVAFLTDLLRELRDQGKLVVV
ASHDFMWLQLLADQIFELTGGQLNKLEAGQPL

Sequences:

>Translated_432_residues
MYFEDRTNGLLRQVHDSVMMIFIGASPERFASSQLLWLLLWFGYMLLPIFASAGITHTYQQGLYPYLNLRFRPRVLTYLW
PLKQTWMIEAGVLLFMGVGFGLASFLFWQEQQLFTAGLFTGLIVMSQLLLLVMETVLEGYFGIVIGVVGPLVMIFLSFLQ
MPLMPLRFAIGSTFASDQQLLGAIGYQLGLIIGLVLIQIFYMPGRWGVMPQIIHEPAVHLEVEQLSVTIKRKKILDHLSL
SLVSPNIYGIVGPNGTGKSVLLKTLLGFIRPSAGSVKMNGVRVDPRHDLPVSVGAIIEHPGFIGDLNGHDNLMALGNIRS
QLSDADIRAIMEKVGLSDDRKAVADYSLGMIQRLGIAQAIMEDQQLILLDEPTNALDREGVAFLTDLLRELRDQGKLVVV
ASHDFMWLQLLADQIFELTGGQLNKLEAGQPL
>Mature_432_residues
MYFEDRTNGLLRQVHDSVMMIFIGASPERFASSQLLWLLLWFGYMLLPIFASAGITHTYQQGLYPYLNLRFRPRVLTYLW
PLKQTWMIEAGVLLFMGVGFGLASFLFWQEQQLFTAGLFTGLIVMSQLLLLVMETVLEGYFGIVIGVVGPLVMIFLSFLQ
MPLMPLRFAIGSTFASDQQLLGAIGYQLGLIIGLVLIQIFYMPGRWGVMPQIIHEPAVHLEVEQLSVTIKRKKILDHLSL
SLVSPNIYGIVGPNGTGKSVLLKTLLGFIRPSAGSVKMNGVRVDPRHDLPVSVGAIIEHPGFIGDLNGHDNLMALGNIRS
QLSDADIRAIMEKVGLSDDRKAVADYSLGMIQRLGIAQAIMEDQQLILLDEPTNALDREGVAFLTDLLRELRDQGKLVVV
ASHDFMWLQLLADQIFELTGGQLNKLEAGQPL

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI105990541, Length=206, Percent_Identity=26.6990291262136, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI45446740, Length=234, Percent_Identity=27.3504273504274, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI47078218, Length=234, Percent_Identity=27.3504273504274, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI27881501, Length=249, Percent_Identity=23.2931726907631, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI30795238, Length=249, Percent_Identity=23.2931726907631, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=24.4019138755981, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI21536376, Length=211, Percent_Identity=25.5924170616114, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=29.2452830188679, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788761, Length=219, Percent_Identity=27.3972602739726, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786563, Length=211, Percent_Identity=29.3838862559242, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790525, Length=194, Percent_Identity=28.3505154639175, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788225, Length=228, Percent_Identity=25.4385964912281, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788165, Length=212, Percent_Identity=31.6037735849057, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1790739, Length=222, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788472, Length=201, Percent_Identity=27.363184079602, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=27.3913043478261, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789890, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI48994997, Length=230, Percent_Identity=31.7391304347826, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788506, Length=238, Percent_Identity=29.8319327731092, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789991, Length=219, Percent_Identity=29.6803652968037, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=24.7747747747748, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786872, Length=182, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081782, Length=227, Percent_Identity=27.3127753303965, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788210, Length=203, Percent_Identity=27.0935960591133, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=27.7227722772277, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787500, Length=207, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789873, Length=186, Percent_Identity=32.7956989247312, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786398, Length=201, Percent_Identity=24.8756218905473, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786803, Length=222, Percent_Identity=27.027027027027, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789593, Length=212, Percent_Identity=25.9433962264151, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789751, Length=228, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87081791, Length=220, Percent_Identity=26.3636363636364, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI2367384, Length=204, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=31.4009661835749, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1790544, Length=227, Percent_Identity=28.1938325991189, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786698, Length=178, Percent_Identity=30.3370786516854, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790190, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786345, Length=221, Percent_Identity=27.6018099547511, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788897, Length=236, Percent_Identity=29.6610169491525, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1787089, Length=189, Percent_Identity=29.1005291005291, Blast_Score=62, Evalue=9e-11,
Organism=Escherichia coli, GI1787792, Length=196, Percent_Identity=26.0204081632653, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17510237, Length=205, Percent_Identity=24.390243902439, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=199, Percent_Identity=24.6231155778894, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=295, Percent_Identity=27.4576271186441, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=190, Percent_Identity=27.8947368421053, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6325030, Length=194, Percent_Identity=30.9278350515464, Blast_Score=67, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=192, Percent_Identity=31.7708333333333, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324314, Length=209, Percent_Identity=30.1435406698565, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116007328, Length=235, Percent_Identity=26.8085106382979, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574150, Length=235, Percent_Identity=26.8085106382979, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24643674, Length=205, Percent_Identity=24.8780487804878, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648314, Length=212, Percent_Identity=25.9433962264151, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=23.444976076555, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24582014, Length=181, Percent_Identity=28.7292817679558, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24582012, Length=181, Percent_Identity=28.7292817679558, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=192, Percent_Identity=27.6041666666667, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571209, Length=198, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281363262, Length=192, Percent_Identity=27.6041666666667, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221512771, Length=199, Percent_Identity=24.1206030150754, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 48069; Mature: 48069

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]