| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493707
Identifier: 116493707
GI number: 116493707
Start: 135603
End: 136367
Strand: Direct
Name: 116493707
Synonym: LSEI_0135
Alternate gene names: NA
Gene position: 135603-136367 (Clockwise)
Preceding gene: 116493705
Following gene: 116493709
Centisome position: 4.68
GC content: 35.95
Gene sequence:
>765_bases ATGAAAATAGCAGCATTATATGATATTCACGGAAATTATCCTGCTTTGAAAGAGGTTTTAAAACAGGTAAAGAAACTGTC TCCAGACTTAGTTGTTTTGGGAGGTGATCTGATCGCGGGACCTATGCCTTTGGAAACGTTGTCGTTATTAAAGCACGTTT CCACCACATTCAAAACTGTGGGAATTATGGGAAACAACGATCAAGATATCGTTGATATTTATGCAAAAAAAAGAGTTGGA CTATCTAGAAAGGCAACTGAGCAATTGACTTGGATAGCAAATCAACTGAGCTATAAGCAAGTGTCTTTCCTAAGAAACTT ACTTCCCAGCATTAGTATTGGAAATTATTTCTTTTGTCATGCTGTGAAAAATGATAACACCACTGTTTTTTCTCCACAAC AAAATAAAGCCTACATAGAGACTTTATTTAAAGGAGTTCAAGAATCGTATATTATTTGTGGACATACTCATATACAGTTT GAATTGTCCTTGCCTAATAAAAAGATTATCAACGCAGGCAGCATAGGCATGCCATTCTCAAACCAATTTGGCGCGCAATG GTTGTGGCTGGACGATAACAGAATTGAATATAAAAGAACCATTTTCAATCAACAAGCTGCAATACAATTGATTAGTCAGA CTGAATACCCCTTCAAGAACGAATTTATTGCGAATAATCTTCGAAGTACAATATCCTTGAGTCAAGGATATAGCATCTTA AATACACTAATTCGCGCCCAAAATGCGCAACACGATTTAAGTTAA
Upstream 100 bases:
>100_bases CCTGCTTTCTTGTTTAGCTAGCACTAACAAGAATAGGTCTTCATGGCCTTTTTGGTCTAGTCGTCAGGGTGTTGCACTTG AATTGTAAACTGGGGTATTA
Downstream 100 bases:
>100_bases TACGTAAAAGCATCTGGAATTATTTCTCAATTAAGCCGCTTGATGTTAAAGATCAGTGAGTATGAATTCCCTGTTAACCG CCTTAGTGAATTCGAAACAG
Product: diadenosine tetraphosphatase-like protein
Products: NA
Alternate protein names: Phosphodiesterase; Ser/Thr Protein Phosphatase Family Protein; Phosphoesterase; DNA Repair Protein; Calcineurin Family Phosphoesterase; Calcineurin-Like Phosphoesterase; Diadenosine Tetraphosphatase; Diadenosine Tetraphosphatase-Like Protein
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKIAALYDIHGNYPALKEVLKQVKKLSPDLVVLGGDLIAGPMPLETLSLLKHVSTTFKTVGIMGNNDQDIVDIYAKKRVG LSRKATEQLTWIANQLSYKQVSFLRNLLPSISIGNYFFCHAVKNDNTTVFSPQQNKAYIETLFKGVQESYIICGHTHIQF ELSLPNKKIINAGSIGMPFSNQFGAQWLWLDDNRIEYKRTIFNQQAAIQLISQTEYPFKNEFIANNLRSTISLSQGYSIL NTLIRAQNAQHDLS
Sequences:
>Translated_254_residues MKIAALYDIHGNYPALKEVLKQVKKLSPDLVVLGGDLIAGPMPLETLSLLKHVSTTFKTVGIMGNNDQDIVDIYAKKRVG LSRKATEQLTWIANQLSYKQVSFLRNLLPSISIGNYFFCHAVKNDNTTVFSPQQNKAYIETLFKGVQESYIICGHTHIQF ELSLPNKKIINAGSIGMPFSNQFGAQWLWLDDNRIEYKRTIFNQQAAIQLISQTEYPFKNEFIANNLRSTISLSQGYSIL NTLIRAQNAQHDLS >Mature_254_residues MKIAALYDIHGNYPALKEVLKQVKKLSPDLVVLGGDLIAGPMPLETLSLLKHVSTTFKTVGIMGNNDQDIVDIYAKKRVG LSRKATEQLTWIANQLSYKQVSFLRNLLPSISIGNYFFCHAVKNDNTTVFSPQQNKAYIETLFKGVQESYIICGHTHIQF ELSLPNKKIINAGSIGMPFSNQFGAQWLWLDDNRIEYKRTIFNQQAAIQLISQTEYPFKNEFIANNLRSTISLSQGYSIL NTLIRAQNAQHDLS
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28670; Mature: 28670
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAALYDIHGNYPALKEVLKQVKKLSPDLVVLGGDLIAGPMPLETLSLLKHVSTTFKTV CEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHEE GIMGNNDQDIVDIYAKKRVGLSRKATEQLTWIANQLSYKQVSFLRNLLPSISIGNYFFCH EEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE AVKNDNTTVFSPQQNKAYIETLFKGVQESYIICGHTHIQFELSLPNKKIINAGSIGMPFS EEECCCEEEECCCCCHHHHHHHHHHHHHCEEEEECEEEEEEEECCCCEEECCCCCCCCCC NQFGAQWLWLDDNRIEYKRTIFNQQAAIQLISQTEYPFKNEFIANNLRSTISLSQGYSIL CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH NTLIRAQNAQHDLS HHHHHHCCCCCCCC >Mature Secondary Structure MKIAALYDIHGNYPALKEVLKQVKKLSPDLVVLGGDLIAGPMPLETLSLLKHVSTTFKTV CEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHEE GIMGNNDQDIVDIYAKKRVGLSRKATEQLTWIANQLSYKQVSFLRNLLPSISIGNYFFCH EEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE AVKNDNTTVFSPQQNKAYIETLFKGVQESYIICGHTHIQFELSLPNKKIINAGSIGMPFS EEECCCEEEECCCCCHHHHHHHHHHHHHCEEEEECEEEEEEEECCCCEEECCCCCCCCCC NQFGAQWLWLDDNRIEYKRTIFNQQAAIQLISQTEYPFKNEFIANNLRSTISLSQGYSIL CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH NTLIRAQNAQHDLS HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA