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The map label for this gene is 116493676

Identifier: 116493676

GI number: 116493676

Start: 97377

End: 97790

Strand: Direct

Name: 116493676

Synonym: LSEI_0104

Alternate gene names: NA

Gene position: 97377-97790 (Clockwise)

Preceding gene: 116493675

Following gene: 116493677

Centisome position: 3.36

GC content: 45.17

Gene sequence:

>414_bases
GTGGTAAAGGTTCATTTTGGTCTCACTCATAAAAAAGTTGATTCAGTTCTAATCATTCAATTCTTTAACGCCGGTATTAT
CTGGGTTCATAACTCAAAGCGCCGTTGGGAGTTGACTGGTGGCAAGTTAGAACCGGGCGAGACGATGGTGCAAGCAGCTG
TCCGCGAATCGTATGAAGAATCAGGTGCTGTTGTTCAGGCCAGTGCGATTGTGCCATTGGGCTACTATGTTTTACCTACT
GGACACACAACAGCAGTGGTTAGTGCTAAAGTTGAACGTTTGCAAGCTATTCCTGCGTCTTCTGAGATTGATGATCGGCA
AGTATGGTTTAAGCCTGTCCCGGATGCTGAGCGTTCTTTTCATGATGATATTTACGCCCAGATTTTTCAACATATTGGGT
GGCCAGATGAGTAG

Upstream 100 bases:

>100_bases
TCATACGTGAGTGAGGCTTCTAAGCTAGAGATGACGCATCATAGTTTTATCTACTTCTAGAGGATGTTTGAAATGCGAGA
TAAGCAAAGGGGGGTATCCT

Downstream 100 bases:

>100_bases
ACGCCAATACGGGTTTCTGCTGAATATTTTATCGGTGGCCGTGATGGCTGTGACACCGGTCATGAACAAGTTCTCGATGA
TCACGCTCTCGCCATTAGCT

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: NUDIX Hydrolase; 8-Oxo-DGTPase; Hydrolase NUDIX Family

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MVKVHFGLTHKKVDSVLIIQFFNAGIIWVHNSKRRWELTGGKLEPGETMVQAAVRESYEESGAVVQASAIVPLGYYVLPT
GHTTAVVSAKVERLQAIPASSEIDDRQVWFKPVPDAERSFHDDIYAQIFQHIGWPDE

Sequences:

>Translated_137_residues
MVKVHFGLTHKKVDSVLIIQFFNAGIIWVHNSKRRWELTGGKLEPGETMVQAAVRESYEESGAVVQASAIVPLGYYVLPT
GHTTAVVSAKVERLQAIPASSEIDDRQVWFKPVPDAERSFHDDIYAQIFQHIGWPDE
>Mature_137_residues
MVKVHFGLTHKKVDSVLIIQFFNAGIIWVHNSKRRWELTGGKLEPGETMVQAAVRESYEESGAVVQASAIVPLGYYVLPT
GHTTAVVSAKVERLQAIPASSEIDDRQVWFKPVPDAERSFHDDIYAQIFQHIGWPDE

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15387; Mature: 15387

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVHFGLTHKKVDSVLIIQFFNAGIIWVHNSKRRWELTGGKLEPGETMVQAAVRESYEE
CEEEEECCCHHHHCCEEEEEECCCCEEEEECCCEEEEECCCEECCHHHHHHHHHHHHHHH
SGAVVQASAIVPLGYYVLPTGHTTAVVSAKVERLQAIPASSEIDDRQVWFKPVPDAERSF
CCCEEEEEEEEEECEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHH
HDDIYAQIFQHIGWPDE
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKVHFGLTHKKVDSVLIIQFFNAGIIWVHNSKRRWELTGGKLEPGETMVQAAVRESYEE
CEEEEECCCHHHHCCEEEEEECCCCEEEEECCCEEEEECCCEECCHHHHHHHHHHHHHHH
SGAVVQASAIVPLGYYVLPTGHTTAVVSAKVERLQAIPASSEIDDRQVWFKPVPDAERSF
CCCEEEEEEEEEECEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHH
HDDIYAQIFQHIGWPDE
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA