Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493660

Identifier: 116493660

GI number: 116493660

Start: 82677

End: 83027

Strand: Direct

Name: 116493660

Synonym: LSEI_0088

Alternate gene names: NA

Gene position: 82677-83027 (Clockwise)

Preceding gene: 116493659

Following gene: 116493661

Centisome position: 2.86

GC content: 44.16

Gene sequence:

>351_bases
ATGAACAATGCACAATATGGCTCTATCAGATTGCAATCAAGCGGTTCACGTGTGACCACGTTTTTCGCACTAGGGGTTGC
TGCCACGGTTATTATTGTTTTAATGTTTGGAACAAGCTTGTTTAGTGCAGGCGGCATGCACATGCACACAATTGTACCTG
CTGTGAGTGCTGCAGCATTTCTAAATGGTTTGAAGACTGCTCGTAAAGTGTACAAAACCACCAAAAACATTCGACATGCC
CTGAAAGTTTTCGGGTCGTGGACAGTGGTTAGTGCTTTGATTTCTTTTGGTGGAGACTGGTTATTGGGACAGGTTCTAAA
CGGCAATTTACAGAGTCTCGCGAACTGGTAA

Upstream 100 bases:

>100_bases
TAAAGCGTTTACAAAACGGATTGATTGTAGTACGATAAACTCGGTTCTAAAAGATGTTTAGTTGTCATCAACGGTGAAAG
GTTTATAGGGCGGTTAAGAA

Downstream 100 bases:

>100_bases
AATGTTAATTTTCAAGATGCTCGTTGAATACAGCTTAAACTTGATTAGAACCAAAAAGGGGTATCTTTTAAGGCCTGAAG
ACGCTCCTTTTTTCCTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNNAQYGSIRLQSSGSRVTTFFALGVAATVIIVLMFGTSLFSAGGMHMHTIVPAVSAAAFLNGLKTARKVYKTTKNIRHA
LKVFGSWTVVSALISFGGDWLLGQVLNGNLQSLANW

Sequences:

>Translated_116_residues
MNNAQYGSIRLQSSGSRVTTFFALGVAATVIIVLMFGTSLFSAGGMHMHTIVPAVSAAAFLNGLKTARKVYKTTKNIRHA
LKVFGSWTVVSALISFGGDWLLGQVLNGNLQSLANW
>Mature_116_residues
MNNAQYGSIRLQSSGSRVTTFFALGVAATVIIVLMFGTSLFSAGGMHMHTIVPAVSAAAFLNGLKTARKVYKTTKNIRHA
LKVFGSWTVVSALISFGGDWLLGQVLNGNLQSLANW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12376; Mature: 12376

Theoretical pI: Translated: 11.73; Mature: 11.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNAQYGSIRLQSSGSRVTTFFALGVAATVIIVLMFGTSLFSAGGMHMHTIVPAVSAAAF
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LNGLKTARKVYKTTKNIRHALKVFGSWTVVSALISFGGDWLLGQVLNGNLQSLANW
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MNNAQYGSIRLQSSGSRVTTFFALGVAATVIIVLMFGTSLFSAGGMHMHTIVPAVSAAAF
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LNGLKTARKVYKTTKNIRHALKVFGSWTVVSALISFGGDWLLGQVLNGNLQSLANW
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA