Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493654

Identifier: 116493654

GI number: 116493654

Start: 79040

End: 79414

Strand: Direct

Name: 116493654

Synonym: LSEI_0082

Alternate gene names: NA

Gene position: 79040-79414 (Clockwise)

Preceding gene: 116493653

Following gene: 116493656

Centisome position: 2.73

GC content: 38.93

Gene sequence:

>375_bases
ATGAAAGCTCTCATTTGCCTCATTCTAAATGCACTTCCGTATGCCGGTATCGCACTGTTGTTAGATTACCAGTATATTTC
TGACGGCCCTGTATTGATATACTTTTTGTTGCAATTAAGCATATCTCTATCAATATGCTTAATTATGAGGGAGGAGACAA
AGAAGATGTGGCGCATACTGTTTTTCTCCCAGTTTTTATCATTGCTTCTAAATCTACTGACGTTATATGCTGGCAACCTG
CCATTCTCAACCTACTTTAAACCATTTACTGTTTATGGCTGGTCTGTATTGACCCAAGTGTTTGGGTTACTGTTGCAGGT
GGTAACGGCCGGGCTTTTCTTATGGGTGAAAAGGGTTATTAAAGATAAAAATTGA

Upstream 100 bases:

>100_bases
GCTGAACTAATTGCGTATAAGTCTTTGTGGACAGTATGATGGGCATACAAATTAAGCTAATATGAAAAAACACACAAAGT
TGAAGGAGTCCAACAAACTC

Downstream 100 bases:

>100_bases
TTGGGAACATTAAGTCAGAGTTGTCAAACGTGAAACCATTTTGAATGGCCTCTTCTTGAGGAACATCAATCAAAAAGTTG
ATGGTTTTCTCTTCATTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKALICLILNALPYAGIALLLDYQYISDGPVLIYFLLQLSISLSICLIMREETKKMWRILFFSQFLSLLLNLLTLYAGNL
PFSTYFKPFTVYGWSVLTQVFGLLLQVVTAGLFLWVKRVIKDKN

Sequences:

>Translated_124_residues
MKALICLILNALPYAGIALLLDYQYISDGPVLIYFLLQLSISLSICLIMREETKKMWRILFFSQFLSLLLNLLTLYAGNL
PFSTYFKPFTVYGWSVLTQVFGLLLQVVTAGLFLWVKRVIKDKN
>Mature_124_residues
MKALICLILNALPYAGIALLLDYQYISDGPVLIYFLLQLSISLSICLIMREETKKMWRILFFSQFLSLLLNLLTLYAGNL
PFSTYFKPFTVYGWSVLTQVFGLLLQVVTAGLFLWVKRVIKDKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14264; Mature: 14264

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALICLILNALPYAGIALLLDYQYISDGPVLIYFLLQLSISLSICLIMREETKKMWRIL
CHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFSQFLSLLLNLLTLYAGNLPFSTYFKPFTVYGWSVLTQVFGLLLQVVTAGLFLWVKRVI
HHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDKN
CCCC
>Mature Secondary Structure
MKALICLILNALPYAGIALLLDYQYISDGPVLIYFLLQLSISLSICLIMREETKKMWRIL
CHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFSQFLSLLLNLLTLYAGNLPFSTYFKPFTVYGWSVLTQVFGLLLQVVTAGLFLWVKRVI
HHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDKN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA