Click here to switch to the map view.

The map label for this gene is 116493614

Identifier: 116493614

GI number: 116493614

Start: 38998

End: 39471

Strand: Direct

Name: 116493614

Synonym: LSEI_0040

Alternate gene names: NA

Gene position: 38998-39471 (Clockwise)

Preceding gene: 116493611

Following gene: 116493619

Centisome position: 1.35

GC content: 33.76

Gene sequence:

>474_bases
ATGGATGTCTATATGCCCTTCATTGGAATGGTTTTTATCTGGCTACTATCGTCTGCAATTGTTTCAATTAGTAGGGAAAA
ACAAAAAAGTGCCTTGCTGCGAGAAGGAAAATATACAAGTGAAAGTTATTTAGAAACTAGGAAGCAAATGCAAAGATTTA
CCACAAATGAGTCAAACCATCTCTTTAATCATATTTACAACATTGTTATTGTTTGGTACTTTTTCATCGTTGTATTCTCA
TTAGGTGCGATAACGACCAATTTTTCAAGTGCTCCAGTTATCTACCTAATTGATACAATTTTCTTCTTCTTTTTTGCTTT
TTTTAACTTTGGTGCATCCTATTATACACAACAGATAAGAAGAAAAATGAATAGCGGGTTGCCGGAACTTACCTTTGTAG
CGAAAGCGCTAATTTTAATTTTTCGAGACTTTGGCACTGCATTAATATTTTTGATTTCTTACCTGAGGGCATAG

Upstream 100 bases:

>100_bases
TGTACCCAATATTTAATTGTGAACAGGCCGAATGTCAACAGGATGCCACCGTGTCTTTAGCTCATGTATAGAAAACGGCT
GGAGAAAGGAATTACAATAT

Downstream 100 bases:

>100_bases
TCTGTTGTAGAAGTGTAAAGTATCCCTCAATTAAATATCTACGCTTGTATTAACTTCTCATAGAAGCAGTGCTGTTTCGC
TAAATTAAAAAGCATCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDVYMPFIGMVFIWLLSSAIVSISREKQKSALLREGKYTSESYLETRKQMQRFTTNESNHLFNHIYNIVIVWYFFIVVFS
LGAITTNFSSAPVIYLIDTIFFFFFAFFNFGASYYTQQIRRKMNSGLPELTFVAKALILIFRDFGTALIFLISYLRA

Sequences:

>Translated_157_residues
MDVYMPFIGMVFIWLLSSAIVSISREKQKSALLREGKYTSESYLETRKQMQRFTTNESNHLFNHIYNIVIVWYFFIVVFS
LGAITTNFSSAPVIYLIDTIFFFFFAFFNFGASYYTQQIRRKMNSGLPELTFVAKALILIFRDFGTALIFLISYLRA
>Mature_157_residues
MDVYMPFIGMVFIWLLSSAIVSISREKQKSALLREGKYTSESYLETRKQMQRFTTNESNHLFNHIYNIVIVWYFFIVVFS
LGAITTNFSSAPVIYLIDTIFFFFFAFFNFGASYYTQQIRRKMNSGLPELTFVAKALILIFRDFGTALIFLISYLRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18399; Mature: 18399

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVYMPFIGMVFIWLLSSAIVSISREKQKSALLREGKYTSESYLETRKQMQRFTTNESNH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
LFNHIYNIVIVWYFFIVVFSLGAITTNFSSAPVIYLIDTIFFFFFAFFNFGASYYTQQIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RKMNSGLPELTFVAKALILIFRDFGTALIFLISYLRA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDVYMPFIGMVFIWLLSSAIVSISREKQKSALLREGKYTSESYLETRKQMQRFTTNESNH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
LFNHIYNIVIVWYFFIVVFSLGAITTNFSSAPVIYLIDTIFFFFFAFFNFGASYYTQQIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RKMNSGLPELTFVAKALILIFRDFGTALIFLISYLRA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA