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The map label for this gene is 116493601

Identifier: 116493601

GI number: 116493601

Start: 27891

End: 28490

Strand: Direct

Name: 116493601

Synonym: LSEI_0027

Alternate gene names: NA

Gene position: 27891-28490 (Clockwise)

Preceding gene: 116493599

Following gene: 116493604

Centisome position: 0.96

GC content: 43.5

Gene sequence:

>600_bases
ATGTTTGAAAATAGTAAGAGCCGACTTGATGCCATTTCTGACGGCGTTTTTGCGGTTGTGCTGACATTAATGGTGTTGGA
CATTAAGGTGCCTAAAACACTGACCATAGCAGATCTTTATGCGACTGGTTTCTCTGTCGTCATTTACTTTATCAGTTTTG
CGGTGGTCGGCCAATACTGGACATTTCACCAAGAACTACTACATACCGTTACGCAACCGAGCACTAATTTCTTAGTATTA
AATTTTTTCTATCTTGTGTTCATCTGTTTAGTGCCATTTGCGACCAGTTTCATCGGTGACCATCCAGGCAGTCGGATCAG
TGCAACATTATTTGCCATCATTATTTTTATGGTCGATTTGTTTCAATTTATTTTGTTCCGATCCGTCATTGGCGAACGAC
CAAAAAAGGAAAACCTAAATGCCCATGATTGGGAGGAATATCGCGCGGTATCACTCATGGTGCTCGTCGCCATTGTTTAC
ATTCTGGTGGGCTTGCTGCTGCCGAAGTGGATTCTTGTTGTGATTGCCCTCGGTTTAGGCGCACGAACCCTGAATAATAC
AATTGGACGCCGGCTTCAGCGCCAAAGCAAAGCTAAGTAA

Upstream 100 bases:

>100_bases
CTCACAGTTTTTTTACGCTGTCGAACGTTGATAGGTCAATCATACGCTAAAGCACCGTCATTTGGGGTTATGATAAAAAG
CGAAGAAGGGACAGATGCAC

Downstream 100 bases:

>100_bases
AGGCGAATAATTTTTCGCATAATGGGAAACGTTCTTTTCTTTCCCATGAATGACCTAGTGAGCTTTAAAGACCCCAGTGC
CATGCCGGAGATTGCGGAGT

Product: integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MFENSKSRLDAISDGVFAVVLTLMVLDIKVPKTLTIADLYATGFSVVIYFISFAVVGQYWTFHQELLHTVTQPSTNFLVL
NFFYLVFICLVPFATSFIGDHPGSRISATLFAIIIFMVDLFQFILFRSVIGERPKKENLNAHDWEEYRAVSLMVLVAIVY
ILVGLLLPKWILVVIALGLGARTLNNTIGRRLQRQSKAK

Sequences:

>Translated_199_residues
MFENSKSRLDAISDGVFAVVLTLMVLDIKVPKTLTIADLYATGFSVVIYFISFAVVGQYWTFHQELLHTVTQPSTNFLVL
NFFYLVFICLVPFATSFIGDHPGSRISATLFAIIIFMVDLFQFILFRSVIGERPKKENLNAHDWEEYRAVSLMVLVAIVY
ILVGLLLPKWILVVIALGLGARTLNNTIGRRLQRQSKAK
>Mature_199_residues
MFENSKSRLDAISDGVFAVVLTLMVLDIKVPKTLTIADLYATGFSVVIYFISFAVVGQYWTFHQELLHTVTQPSTNFLVL
NFFYLVFICLVPFATSFIGDHPGSRISATLFAIIIFMVDLFQFILFRSVIGERPKKENLNAHDWEEYRAVSLMVLVAIVY
ILVGLLLPKWILVVIALGLGARTLNNTIGRRLQRQSKAK

Specific function: Unknown

COG id: COG3548

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI14150104, Length=182, Percent_Identity=32.4175824175824, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22493; Mature: 22493

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFENSKSRLDAISDGVFAVVLTLMVLDIKVPKTLTIADLYATGFSVVIYFISFAVVGQYW
CCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFHQELLHTVTQPSTNFLVLNFFYLVFICLVPFATSFIGDHPGSRISATLFAIIIFMVDL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FQFILFRSVIGERPKKENLNAHDWEEYRAVSLMVLVAIVYILVGLLLPKWILVVIALGLG
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ARTLNNTIGRRLQRQSKAK
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFENSKSRLDAISDGVFAVVLTLMVLDIKVPKTLTIADLYATGFSVVIYFISFAVVGQYW
CCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFHQELLHTVTQPSTNFLVLNFFYLVFICLVPFATSFIGDHPGSRISATLFAIIIFMVDL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FQFILFRSVIGERPKKENLNAHDWEEYRAVSLMVLVAIVYILVGLLLPKWILVVIALGLG
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ARTLNNTIGRRLQRQSKAK
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA