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The map label for this gene is yjqC [H]

Identifier: 116493516

GI number: 116493516

Start: 1765244

End: 1766080

Strand: Direct

Name: yjqC [H]

Synonym: PEPE_1788

Alternate gene names: 116493516

Gene position: 1765244-1766080 (Clockwise)

Preceding gene: 116493512

Following gene: 116493519

Centisome position: 96.34

GC content: 44.8

Gene sequence:

>837_bases
ATGTTTAAACATCAAAAGGAACTACAGTTTGAAGCAAAACCAGATCGCCCAGATCCAATCGTTGCTAAGTACCTTCAAGA
ATTAATTGGGGGACAATATGGTGAAATGAGTGTGGCCATGCAATATCTTTTCCAAGGCTGGAGTTGCCGAGGAGAAGAAA
AGTATAAAGATATGATAATGGATATCGCCACTGAAGAAATTGGCCACGTCGAAATGTTGGCTACCATGGTGGCACGACTT
TTAGAAGATGCTCCCATCGCCGACCAACAAGCTGCTATGCAAGCGAATCCCACAGTTGGAGCCATCATCTCTGGAATGAA
CCCCCAACATGCTATTGTTGCCGGTTTAGGCCCTCGCCCTGCTGACAGCGTTGGTAACCCTTGGAGTGGTGCCTACATTA
TTGCTAGTGGTAACCTACTTGCCGATTTTCGTGCTAACCTCAATGCTGAATCCCAAGGTCGACTCCAAGTTGCTCGAATC
TATGAGATGATTGACGACCAAGGTGTTAAAGACTTACTTTCTGTCCTACTAGCTCGTGACAGTTATCACCAAAATCTCTG
GGCTAGTGCGGTTAAAGAACTCGAAGAAAAAGAGGGTTCAATGTTAGTACCGACGACTTTCCCTCGGGATAAAGAACGTA
AAGACATTGCTTACGATTTCTACAACTTCTCTCAAGGAGATGAGAGTAGTACCGGGCCATGGGCCAGTGGAGAGGCTTTG
GATGGCGAAGGTGAATACCACTGGTATGACGAACCAAAAGTAGAAGGTTCGGCTCCTAATCTAAAACCCGTTTCTCCTAA
AATGTATGGAACCTCTGAAAATAAATCAGAAATTTAA

Upstream 100 bases:

>100_bases
CCGTAAATTTAGTTAATTTATTTTTTTAAATGTAAGCATTTTATTTGAGCTATATCAATAAAACCTTTAATATCTGAACC
ACAAAAGGAGGGATTGTATA

Downstream 100 bases:

>100_bases
ATAAGCGAAAAGCGAAAAAATCATAACTGATTTTTTCGCTTTTTTAAGCTTTTATTTTAATTTTCTTGGGGTTGCGAAAT
AGTAACCTTGCTGTTTTTCT

Product: Mn-containing catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MFKHQKELQFEAKPDRPDPIVAKYLQELIGGQYGEMSVAMQYLFQGWSCRGEEKYKDMIMDIATEEIGHVEMLATMVARL
LEDAPIADQQAAMQANPTVGAIISGMNPQHAIVAGLGPRPADSVGNPWSGAYIIASGNLLADFRANLNAESQGRLQVARI
YEMIDDQGVKDLLSVLLARDSYHQNLWASAVKELEEKEGSMLVPTTFPRDKERKDIAYDFYNFSQGDESSTGPWASGEAL
DGEGEYHWYDEPKVEGSAPNLKPVSPKMYGTSENKSEI

Sequences:

>Translated_278_residues
MFKHQKELQFEAKPDRPDPIVAKYLQELIGGQYGEMSVAMQYLFQGWSCRGEEKYKDMIMDIATEEIGHVEMLATMVARL
LEDAPIADQQAAMQANPTVGAIISGMNPQHAIVAGLGPRPADSVGNPWSGAYIIASGNLLADFRANLNAESQGRLQVARI
YEMIDDQGVKDLLSVLLARDSYHQNLWASAVKELEEKEGSMLVPTTFPRDKERKDIAYDFYNFSQGDESSTGPWASGEAL
DGEGEYHWYDEPKVEGSAPNLKPVSPKMYGTSENKSEI
>Mature_278_residues
MFKHQKELQFEAKPDRPDPIVAKYLQELIGGQYGEMSVAMQYLFQGWSCRGEEKYKDMIMDIATEEIGHVEMLATMVARL
LEDAPIADQQAAMQANPTVGAIISGMNPQHAIVAGLGPRPADSVGNPWSGAYIIASGNLLADFRANLNAESQGRLQVARI
YEMIDDQGVKDLLSVLLARDSYHQNLWASAVKELEEKEGSMLVPTTFPRDKERKDIAYDFYNFSQGDESSTGPWASGEAL
DGEGEYHWYDEPKVEGSAPNLKPVSPKMYGTSENKSEI

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: NA

Molecular weight: Translated: 30828; Mature: 30828

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKHQKELQFEAKPDRPDPIVAKYLQELIGGQYGEMSVAMQYLFQGWSCRGEEKYKDMIM
CCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
DIATEEIGHVEMLATMVARLLEDAPIADQQAAMQANPTVGAIISGMNPQHAIVAGLGPRP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCC
ADSVGNPWSGAYIIASGNLLADFRANLNAESQGRLQVARIYEMIDDQGVKDLLSVLLARD
CCCCCCCCCCEEEEEECCEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
SYHQNLWASAVKELEEKEGSMLVPTTFPRDKERKDIAYDFYNFSQGDESSTGPWASGEAL
HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DGEGEYHWYDEPKVEGSAPNLKPVSPKMYGTSENKSEI
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFKHQKELQFEAKPDRPDPIVAKYLQELIGGQYGEMSVAMQYLFQGWSCRGEEKYKDMIM
CCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
DIATEEIGHVEMLATMVARLLEDAPIADQQAAMQANPTVGAIISGMNPQHAIVAGLGPRP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCC
ADSVGNPWSGAYIIASGNLLADFRANLNAESQGRLQVARIYEMIDDQGVKDLLSVLLARD
CCCCCCCCCCEEEEEECCEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
SYHQNLWASAVKELEEKEGSMLVPTTFPRDKERKDIAYDFYNFSQGDESSTGPWASGEAL
HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DGEGEYHWYDEPKVEGSAPNLKPVSPKMYGTSENKSEI
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]